| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0228 |
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| Symbol | |
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| ID | 5056666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 259989 |
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| End bp | 261416 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472500 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001157091 |
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| Protein GI | 145592794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.697519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTGG ATCACGAACG AATCATCCGG GACGGCACGG CCCGCCTGTC AATGGCGTCG
ACCGTCGCCG AGGCGTGCCA GTGGACCGTC ACCGCCCTGG CCCCGTCCAC CCCAGCCACC
ATCTCGGTGC TCCTGGAGGT TCACGACCGG CTCCGTTGCA TCGCGGCCAC CGGCTCGTGG
CAGGTCTTCT CGACCGTCCC GCCGGCTACC GGCGTCGTCG GTCGGGTACA CACCACCGGT
CATGCCGCGG TCATCACCGA TCTCGGTGCG GACCCGAATC GCCTTCCGGT CCGTCCCGAC
GCCACCAGTG AGGTTTGCGT ACCGGTGCCA GGCTCGACTG GCCGACCTGT CGGCGTCCTC
GACCTGCTCT GGAGCCAACC GGCGGACCTG ATGGCGTGGC GGGACACTGC CGAACGCCTC
GCGGAACGGC TCGGCGCGCG GATCGTCGCA CTCGGCGGTC CGCCGGCGGA AACCCGGAGC
GAGAAGCTGT TGCGGCACGC GGCCGCGCTG GCCGCCGCCG GCACCGAGCA GGAGTTGCGA
CACGCGGCCA GCACGGCCGC GCGGGACGTG TCGACGCTCT CCACCGCTGT TCTGGTGCTC
CCCGGGCATC ACGGGCCTCA ACTGTGCGCG CCGACCACCG TCCCCGACGA ATTGGAGGCC
CGGGTCCGGG CCACGCTCTC CGCGGCCGGC CCGGAGGCGC TGGCGCGGAT GGTCGACCTG
GCTCACCGCT ACGGCGCCGG GTACACCCTC GGTGAGACCG AACAGTCGGC GACCGACGAC
CACGCTCCGC TGGCCCGGGC CGGGGTGCGC ACGCTGGTGG CGGTGCCGGT CAACTCGGGC
GGCGACGCCG GGTTGCTGCT CGTCGCCGAC GCGCGGCGAC TCCGTCCCGA CCCGACCACC
GTCAACCTGC TGGAGTTACT CGCCGGCCAG GCCGGCAGTG CCCTGGACCG GCTCGAGACC
GTGGCTCGGC TCCGCGAGCG GGCCAGCTCC GACCCGTTGA CCGGGTTGCG ACACACCGGG
CCGTTCGGGG AGCGGATCGC GGCGGCCGCC CCCGGACGTA CGGCTCTGCT CGCGATCGAC
GTGGACGGCT TCAAGACCGT CAACGACACG TACGGTCACC AGGCCGGTGA CCGGCTGCTG
GTGAGGTTGG CGCGGGCGTT GGAGGGCGCG CTGCGCCAGG GCGACGAGCT GTACCGGACC
GGTGGCGACG AATTCGTGGC GGTGATCGAG GTGAACCGCC CCGACGAGGC GGTCCGGGTC
GCGGAACGCC TCACTGCGGC GGCGCGCCGG ATCGGTCGCA CCATCAGCGT GGGCGTCGCC
CTCCCCCACC CGGACGAGCC CGCCGACCAC GCCCTCCACC GCGCCGACCA GGCGCTCTAC
CGGGTAAAAC GGGAGGGCCG CGACGGCGTA CGCCTGGCCG CCGCCTGA
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| Protein sequence | MRVDHERIIR DGTARLSMAS TVAEACQWTV TALAPSTPAT ISVLLEVHDR LRCIAATGSW
QVFSTVPPAT GVVGRVHTTG HAAVITDLGA DPNRLPVRPD ATSEVCVPVP GSTGRPVGVL
DLLWSQPADL MAWRDTAERL AERLGARIVA LGGPPAETRS EKLLRHAAAL AAAGTEQELR
HAASTAARDV STLSTAVLVL PGHHGPQLCA PTTVPDELEA RVRATLSAAG PEALARMVDL
AHRYGAGYTL GETEQSATDD HAPLARAGVR TLVAVPVNSG GDAGLLLVAD ARRLRPDPTT
VNLLELLAGQ AGSALDRLET VARLRERASS DPLTGLRHTG PFGERIAAAA PGRTALLAID
VDGFKTVNDT YGHQAGDRLL VRLARALEGA LRQGDELYRT GGDEFVAVIE VNRPDEAVRV
AERLTAAARR IGRTISVGVA LPHPDEPADH ALHRADQALY RVKREGRDGV RLAAA
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