Gene Strop_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0226 
Symbol 
ID5056664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp257654 
End bp258919 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content69% 
IMG OID640472498 
Productaspartate kinase 
Protein accessionYP_001157089 
Protein GI145592792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCG TGGTGCAGAA GTACGGCGGA TCCTCCGTCG ACAACGCCGA GCGGATCAAG 
CGGGTGGCTG AGCGGATCGT CGCCGCCCGC AAGGCCGGCG ACGACGTGGT GGTGGTGGTC
TCCGCCATGG GCGACACCAC CGACGAGCTG ACCGACCTGG CCAACCAGGT CAGTCCGCTG
CCGCCCGGTC GCGAGCTGGA CATGCTGCTC ACCGCCGGGG AGCGCATCTC GATGGCGCTC
CTCGCGATGG CGATCCACAA CCTGGGGTAC GAGGCGCGAT CGTTCACCGG CTCGCAGGCC
GGGGTCATCA CCACCTCGGT GCACGGCCGG GCGCGGATCA TCGATGTCAC GCCGGGGCGG
CTCAAGGGCG CCCTCGACGA GGGTGCGGTG GTCATCGTCG CCGGCTTCCA GGGCGTGTCG
CAGGACACCA AGGACGTCAC CACCCTGGGG CGCGGTGGGT CGGACACCAC CGCCGTGGCC
CTCGCCGCCG CGCTCAACGC CGACGTCTGC GAGATCTACA GCGACGTGGA CGGCGTCTTC
AGCGCCGATC CGCGGATCGT GCCGGACGCC CGGCACATCC GACAGATCAC CTACGAGGAG
ATGCTGGAGC TGGCCGCCTG CGGCGCCAAG ATTCTGCACC TGCGCAGCGT GGAGTACGCC
CGCCGGGCGG GGTTGCCGGT CCACGTCCGT TCGTCATACT CGACCAACAC CGGCACGATG
GTCACCGGAT CGATGGAGGA CCTTCCCGTG GAACAGGCGC TGATCACCGG GGTCGCCCAC
GACCGCAGCG AAGCCAAGAT CACGATCGTC GGTGTGCCCG ACGAGCCGGG TGCGGCCGCG
TGGATCTTCG ACACCGTCGC CGGTGCGGAG ATCAACATAG ACATGATCGT GCAGAACGTC
TCCACCGAGG GCACCGGCCG GACGGACATC TCGTTCACCC TGCCCAAGAC CGACGGCCCC
ACCGCCATGG CCGCGCTCAG CAAGATCCAG GACAGCGTCA AGTTCAAGGG GCTGCTCTAC
GACGACCACG TCGGCAAGGT CTCGCTGATC GGCGCCGGGA TGCGCTCCCA CCCGGGCGTC
GCAGCGGGCT TCTTCGCCGC CCTCGGCCAG GCCGGCGTGA ACATCGAGAT GATCTCCACG
TCGGAGATCC GGGTCTCGGT GGTGTGCCGC GACACCGACC TGGACGACGC CGTGCGCGCC
ATCCACGACG CGTTTGAGCT CGGTGGTGAC ACCGAGGCGG TCGTCTACGC GGGGACGGGG
CGGTAG
 
Protein sequence
MALVVQKYGG SSVDNAERIK RVAERIVAAR KAGDDVVVVV SAMGDTTDEL TDLANQVSPL 
PPGRELDMLL TAGERISMAL LAMAIHNLGY EARSFTGSQA GVITTSVHGR ARIIDVTPGR
LKGALDEGAV VIVAGFQGVS QDTKDVTTLG RGGSDTTAVA LAAALNADVC EIYSDVDGVF
SADPRIVPDA RHIRQITYEE MLELAACGAK ILHLRSVEYA RRAGLPVHVR SSYSTNTGTM
VTGSMEDLPV EQALITGVAH DRSEAKITIV GVPDEPGAAA WIFDTVAGAE INIDMIVQNV
STEGTGRTDI SFTLPKTDGP TAMAALSKIQ DSVKFKGLLY DDHVGKVSLI GAGMRSHPGV
AAGFFAALGQ AGVNIEMIST SEIRVSVVCR DTDLDDAVRA IHDAFELGGD TEAVVYAGTG
R