Gene Strop_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0225 
Symbol 
ID5056663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp256817 
End bp257419 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID640472497 
Productnitroreductase 
Protein accessionYP_001157088 
Protein GI145592791 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.936652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.851937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TCACCCCGCT GATCGCCTTC CGGTGGAGCC CCCGGTCCTT CGACCCCGAC 
GCCGACCTCG GCCCGACCGA GGTCGACCTC CTCCTGGAGG CGGCCCGGTG GGCGCCCTCA
GCGGCGAACC GGCAACCGTG GCGCTTCGCC CTCGGCCACC GCGACGACGA GACGTGGAAA
CGGATCATGG TCAACCTCCC GGAGCGGGAC CAGCGGTGGG CGGGCCGCGC CTCACTGCTG
CTACTCGCCG CACACCTCGC ACCCGCCACC GAACCGGCCG AGGAGACCGC CTACGACCTG
GGGCACGCCG TGGCACAGCT GACCACACAG GCGACCGCGC TCGGGCTGCA CACCCGTCAG
CTACACGAAC TGGACCGCAC CGGCCTCGCC ACCGAGCTCG AACTCCCCGC CGACCTCCGG
CCCGCCACGG TGGTCGCGAT CGGTCGACTC GGCGACCCCC TCAATCTCCC CGCCGACCTG
ATCGAGGCAG AGACCGGCCT TCGGCGGCGC CGGCCCGTCG CTGACCTGCT GCTGGTCAGC
CCCGCTGCGA CCCCCATCTC ACAGTACGGG CGATCCTTCC CGGATCCAGT CCACGCCACG
TAG
 
Protein sequence
MTDLTPLIAF RWSPRSFDPD ADLGPTEVDL LLEAARWAPS AANRQPWRFA LGHRDDETWK 
RIMVNLPERD QRWAGRASLL LLAAHLAPAT EPAEETAYDL GHAVAQLTTQ ATALGLHTRQ
LHELDRTGLA TELELPADLR PATVVAIGRL GDPLNLPADL IEAETGLRRR RPVADLLLVS
PAATPISQYG RSFPDPVHAT