Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0225 |
Symbol | |
ID | 5056663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 256817 |
End bp | 257419 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472497 |
Product | nitroreductase |
Protein accession | YP_001157088 |
Protein GI | 145592791 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.936652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.851937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TCACCCCGCT GATCGCCTTC CGGTGGAGCC CCCGGTCCTT CGACCCCGAC GCCGACCTCG GCCCGACCGA GGTCGACCTC CTCCTGGAGG CGGCCCGGTG GGCGCCCTCA GCGGCGAACC GGCAACCGTG GCGCTTCGCC CTCGGCCACC GCGACGACGA GACGTGGAAA CGGATCATGG TCAACCTCCC GGAGCGGGAC CAGCGGTGGG CGGGCCGCGC CTCACTGCTG CTACTCGCCG CACACCTCGC ACCCGCCACC GAACCGGCCG AGGAGACCGC CTACGACCTG GGGCACGCCG TGGCACAGCT GACCACACAG GCGACCGCGC TCGGGCTGCA CACCCGTCAG CTACACGAAC TGGACCGCAC CGGCCTCGCC ACCGAGCTCG AACTCCCCGC CGACCTCCGG CCCGCCACGG TGGTCGCGAT CGGTCGACTC GGCGACCCCC TCAATCTCCC CGCCGACCTG ATCGAGGCAG AGACCGGCCT TCGGCGGCGC CGGCCCGTCG CTGACCTGCT GCTGGTCAGC CCCGCTGCGA CCCCCATCTC ACAGTACGGG CGATCCTTCC CGGATCCAGT CCACGCCACG TAG
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Protein sequence | MTDLTPLIAF RWSPRSFDPD ADLGPTEVDL LLEAARWAPS AANRQPWRFA LGHRDDETWK RIMVNLPERD QRWAGRASLL LLAAHLAPAT EPAEETAYDL GHAVAQLTTQ ATALGLHTRQ LHELDRTGLA TELELPADLR PATVVAIGRL GDPLNLPADL IEAETGLRRR RPVADLLLVS PAATPISQYG RSFPDPVHAT
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