| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0224 |
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| Symbol | |
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| ID | 5056662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 254897 |
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| End bp | 256651 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472496 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001157087 |
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| Protein GI | 145592790 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACC CTGCTGTCAC CCCCGACGCT GAGACCAACC CCATTGCCCG GCAACGCCCC
AGCCGCATGC CGTACCACCG CTACCAGCCC TACCAGCGGC AGTTCCACAC CGACCTGCCG
GACCGCAGCT GGCCCACCCG GCACGTCGAG GCCGCGCCGC GCTGGTGCGC GGTCGACCTG
CGAGATGGCA ACCAGGCCCT GATCGACCCG ATGTCGCCCG AACGCAAGCG GCGGATGTTC
CAGCTCCTGG TGCAGCTGGG CTACAAGGAG ATCGAGGTTG GCTTCCCCTC GGCGAGCCAG
TCCGACTACG ACTTCGTCCG GCAGCTCATC GAGCAGGACC TGATCCCCGA CGATGTCACC
ATCCAGGTGC TGACGCAGTG CCGGGAGCAC CTGATCGACC GCACCTTCGC GGCGCTGCGG
GGCGCGAAGC GGGCGATCGT GCACTTCTAC AACTCGACCT CGACCCTGCA ACGCCAGGTC
GTCTTCGGGC TGGACCGGGA CGGCATCACC GACATCGCGA CCACCGGTGC CCGGCTCTGC
CAGAAGTACG CGGAGATCCA CACCCCGGAC ACCGACATCC ACTACGAGTA CTCACCCGAG
TCGTACACCG GCACCGAGCT GGACTACGCC GTGGAGGTCT GCACGAAGGT GATTGAGGTC
CTCGACCCGA CACCCGACCA CCGGCTGATC GTCAACCTGC CGGCCACCGT CGAGATGGCG
ATGCCGAACG TCTACGCCGA CTCGATCGAG TGGATGCACC GACACCTGCC TCGGCGGGAC
AGTCTGGTGC TCAGCCTGCA CCCGCACAAC GACCGGGGCA CCGGAGTGGC CGCCGCCGAG
CTGGGTCTGC TCGCCGGAGC AGACCGGATC GAGGGTTGCC TCTTCGGTAA CGGCGAGCGC
ACCGGCAACG TGGACCTGGT CACCCTGGGC CTGAACCTCT TCTCCCAGGG CATCGATCCG
ATGATCGACT TTTCGAACAT CGACGAGGTC AAACGTGCTG TCGAGTACTG CAACCAACTA
CCCGTACACG AGCGCCACCC GTACGCCGGC GACCTGGTCT ACACCGCCTT CTCCGGCTCC
CACCAGGACG CGATCAACAA GGGATTCGAC GCCCTCGCGG CCTCCGCCGA GACCGCCGGC
GTCCCGGTCG AGCAGCACCC GTGGGCGGTG CCCTACCTGC CGATCGACCC GAAGGACCTG
GGTCGCACCT ACGAAGCCGT CATCCGCGTC AACTCGCAGT CCGGCAAGGG CGGCGTCGCG
TACATCATGA AGACCGAGCA CCAGCTCGAC CTGCCCCGCC GGCTCCAGAT CGAGTTCTCC
GGCGTGGTCC AGCAGGTCAC CGACGACAAC GGCGGTGAGG TTGACCCGCA GACCATGTGG
GAGATCTTCG CCGGGCAGTA CCTCCTGGAC CACCAGGCGA ACCCCGCGGT CACACTGACC
GACTACACGA TCGGCACGGT GGACGGCAAG GTCGAGTTCG AGGCGCTCGT CGGGCACGGC
GGCGGACAAC ACGCCGTCAC CGCCATCGGC AACGGCCCGG TGGACGCGTA CGTCAACGCC
CTGCAGTCCC TCGGCATCAA CGTACGCGTA CTCGACTACC ACGAACATGC CCTCTCCTCC
GGCGGTGACG CCCAGGCCGC CGCGTACGTG GAGTCCAAGG TAGATGGCCG TACGGTGTGG
GGCGTCGGTG TGGACGCCAA CATCGTCACC GCCACCATCA GGGCGGTGAC CAGCGCCGTC
AACCGCGCCC ACTGA
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| Protein sequence | MAHPAVTPDA ETNPIARQRP SRMPYHRYQP YQRQFHTDLP DRSWPTRHVE AAPRWCAVDL
RDGNQALIDP MSPERKRRMF QLLVQLGYKE IEVGFPSASQ SDYDFVRQLI EQDLIPDDVT
IQVLTQCREH LIDRTFAALR GAKRAIVHFY NSTSTLQRQV VFGLDRDGIT DIATTGARLC
QKYAEIHTPD TDIHYEYSPE SYTGTELDYA VEVCTKVIEV LDPTPDHRLI VNLPATVEMA
MPNVYADSIE WMHRHLPRRD SLVLSLHPHN DRGTGVAAAE LGLLAGADRI EGCLFGNGER
TGNVDLVTLG LNLFSQGIDP MIDFSNIDEV KRAVEYCNQL PVHERHPYAG DLVYTAFSGS
HQDAINKGFD ALAASAETAG VPVEQHPWAV PYLPIDPKDL GRTYEAVIRV NSQSGKGGVA
YIMKTEHQLD LPRRLQIEFS GVVQQVTDDN GGEVDPQTMW EIFAGQYLLD HQANPAVTLT
DYTIGTVDGK VEFEALVGHG GGQHAVTAIG NGPVDAYVNA LQSLGINVRV LDYHEHALSS
GGDAQAAAYV ESKVDGRTVW GVGVDANIVT ATIRAVTSAV NRAH
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