Gene Strop_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0222 
Symbol 
ID5056660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp252578 
End bp253327 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640472494 
Producthypothetical protein 
Protein accessionYP_001157085 
Protein GI145592788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.584066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCAAGA GTGCCCCGAC TCGATCTCGA AGCGGCTACG AAACGCCAAA ACCGCCCTCC 
CAGATACTGT GCGGGGCCGC CCGAAACCGC CAAGCTAAAG AGGTGTCTCT GCGTACCAGA 
TCCGCACCGC TGCTCGCGAC AGCGCTGGCG CTCGGCCTGG CCGGCTGCGT CCCGGCCACC 
ACACCGGACC CGACGCCCAC CAGCGCCGGT GGGAACGCCA TGGAGAAGCT GGCCGAGCTG 
ACGGTGGCCA GCGCCGGCTC GATGAAGGGC TACAGCCGCG ACCGCTTCCC CCACTGGCGG 
GGCACCGGCA AGAACTGCGA CGTCCGGGAC ACCGTGCTCG CGCGCGACGG GGAGAGCATC 
AAGCTCTCCG GCTGTAACGT GGTCGGCGGG CGCTGGGAGA GCGTCTACGA CGGCCTGGTC 
CTGACCGACC CCTCCGAGGT CGATGTTGAC CACATGGTGC CGCTGGCGAA CGCCTGGCGA 
TCCGGTGCCG ACGGGTGGAC CGACACGAAG CGGGGTGATT TCGCCAACGA CACCCGGCTG 
CCGCACCTCT TCGCGGTTTC CCGCACCGCC AACCGGTCGA AGGGTGATCA GGATCCATCC 
CAGTGGCGAC CGGCGAACCG GTCGTACTGG TGCCGCTACG CCGAAAGCTG GGTCACGGTG 
AAACATCATT GGCAGTTGTC GGTACACACC GACGAGAAGA CGGCGCTGGC CGACATGTTG 
GCGGGCTGTA CCGGGGCGAG CCGACCATGA
 
Protein sequence
MPKSAPTRSR SGYETPKPPS QILCGAARNR QAKEVSLRTR SAPLLATALA LGLAGCVPAT 
TPDPTPTSAG GNAMEKLAEL TVASAGSMKG YSRDRFPHWR GTGKNCDVRD TVLARDGESI 
KLSGCNVVGG RWESVYDGLV LTDPSEVDVD HMVPLANAWR SGADGWTDTK RGDFANDTRL 
PHLFAVSRTA NRSKGDQDPS QWRPANRSYW CRYAESWVTV KHHWQLSVHT DEKTALADML 
AGCTGASRP