Gene Strop_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0194 
Symbol 
ID5056630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp224272 
End bp225483 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID640472464 
Productacyltransferase 3 
Protein accessionYP_001157057 
Protein GI145592760 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC CCGCTACCCC GAGTTCGTCG CATCCTCCGA CCACCGTCCG CCTACCTGCC 
CTGGATGCGC TCCGCGCGAT CGGTTCGGTA GCCGTCGTCG CCCACCACGT CGGATTCCAT
ACGGGTGTGA GCCTGAACAG CCAGTGGGGC ACCTGGTTGG CACGGATGGA CGTCGGCGTC
GCCATCTTCT TCGTACTCTC CGGATTCCTG CTCTTCCGGC CCTGGGCATC CAGTGTCGCC
GCCGGGCGCC CCCGGCCCGG CGTTCGCCGG TACTTCTGGC GGCGTGCCCT GCGAATCCTG
CCGGCCTACT GGCTGACGGT GTCGGTCTGC CTGATCGTTC TGCCGCAGAA CCGGCCGGCC
TCGGCCGGTG ACTGGCTCCG TCACCTGACC TTCACCCAGA TCTATCAACC CGATCAGCTT
CGTGCGGGCC TCGGTCAGAC CTGGAGCCTC GCCACCGAGG TCGTGTTCTA CCTGGTCCTG
CCACTGGTCG CGGTGCTCGC GGTAGGCCGG ACCTGGCGCC CGGTCCGCAC CCTGGTGATC
GCCGCGGGGG GCACCCTGAT GACTGCCGGG TGGCTCATCC TGATGGGGTT TGGCGTCATC
GACACCGCGG TCCACACCAT GTGGCTCCCC TCGTACGCGG CCTGGTTCTG CGGGGGCATG
GTCCTGGCGG TGGCGCATGT TGCCCTACAA ACCGGTACGG GCCCGGCTGC CCTGCGCGTC
CTCGACGACC TCGCCGCGGC GCCAGTCGCC TGCTGGTCCG CGGCCGCGGG CCTACTGGCG
ATCGCGACGA CACCCATCGC TGGCCCGCTT GACCTCGCCG AGCCGACGGC GGCGGAGTTC
GCCGTGAAGC TCACCCTCTA TCTCGCGGTC GGAATCCTGA TCATGATTCC GGTGGCGTTC
GGTGAGCGGA AGACCCGAGT CCACCAGGCG TTCGGCAGCG CCTCCGCCCG TTGGCTCGGC
CTCGTCTCGT ACGGGCTGTT CCTCTGGCAT CCGCTGGTGA TCGAAATGAT TTACCTCGTG
GGGGACCGCC CGCTGTTCAC CGGCGACCTA CTCGAGACCT TCGCTCTGAC GATGGCGGGT
GGCCTGGCGT TCGCGGCGGC GAGCTACTAC GGCATCGAAC GCCCGATCCA GTCGCTCGGC
GACCGTCGCC GCTCTCGGCC GACCACTCCC CGAGCAGGGG ACAGAGCGAC AGCAGTCAAT
TCACCACATT GA
 
Protein sequence
MSAPATPSSS HPPTTVRLPA LDALRAIGSV AVVAHHVGFH TGVSLNSQWG TWLARMDVGV 
AIFFVLSGFL LFRPWASSVA AGRPRPGVRR YFWRRALRIL PAYWLTVSVC LIVLPQNRPA
SAGDWLRHLT FTQIYQPDQL RAGLGQTWSL ATEVVFYLVL PLVAVLAVGR TWRPVRTLVI
AAGGTLMTAG WLILMGFGVI DTAVHTMWLP SYAAWFCGGM VLAVAHVALQ TGTGPAALRV
LDDLAAAPVA CWSAAAGLLA IATTPIAGPL DLAEPTAAEF AVKLTLYLAV GILIMIPVAF
GERKTRVHQA FGSASARWLG LVSYGLFLWH PLVIEMIYLV GDRPLFTGDL LETFALTMAG
GLAFAAASYY GIERPIQSLG DRRRSRPTTP RAGDRATAVN SPH