| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0182 |
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| Symbol | |
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| ID | 5056615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 200237 |
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| End bp | 201217 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472449 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001157045 |
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| Protein GI | 145592748 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0556726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCG AAGCTGCGGA CAATGGCAGA ACTGTGGACA GGATGCGACG GAATGTGGCT
CCCACATCCC GCCACATCGG CGTCACCGGG CGAGGCGTGC CGATCTTCGG CTTCGGCTAC
GTGCCCGGCA TCGCCCCGGT CTCGGTGGCC CGTCACTGCC GCGGAGAGCC GGTCGTCGAC
GTCGGCAGCA TCGGCGCCCA CACCCACGAC TTCCTGGTGC TCTCCTACGC CCACCTGGCC
CACGGGACGG TACACATCGA CGAGCGCACC TGGACGGTAA GCGACGGTGA CCTCTTCGTC
ATCGCACCAG GGCAGGTTAT GTCCGCCGGC GACCCGTTCG AGGAGGCCAC CACCGACGGC
TGGACCGTGT GGTTCCCGGC CGACGTGGTC CGACCCGGGA TGCCTGGCGC CTACTCCTCC
TGGCGGACGC ACCCGTTACT CTTCCCGTTC GCCCAGGGCG CCAACCGGGC GCAGCGACTA
CCGGTCCCAC CGGTCGACCG GGCCGACCTG GTGGAGCGCT TCGCCGCGCT CGACGCTGAG
CTCCGGGCCC GCCGAGACGG TCACCAAGAG GCCGCCCTCG CCCACCTGAC CCTGCTGCTC
GTTACCGTGG CCCGGTTGTC GACCGGCCTC GCCGACCATC TACGCTGCGC TGACGAACCG
CTACTGGCGG CTGTCTTCGA GGCCATCGAG GAGCGCTACC ACCAGCCCAT CTCCCTCGCT
GACATCGCTG CCGACCTCGC GCTCACCGCC GGTTACCTCA CCACCGTGGT GCGTCGAAAG
ACCGGCCGAA CCGTTACCCA GTGGATCGCC CAGCGCCGGA TGCAGCAGGC ACGCCTGCTG
CTGGCCGAGA CCGACCTGGC CGTAGGCGCG ATCAGCCGCC GGGTCGGCTA CCCCGACACC
AGCTACTTCA GCAAACGCTT CCGCGCCCGC CACGGAGTCA CCCCCACTCA GTGGCGCGCC
ACCTCCCCTC CCACCGGGTG A
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| Protein sequence | MAGEAADNGR TVDRMRRNVA PTSRHIGVTG RGVPIFGFGY VPGIAPVSVA RHCRGEPVVD
VGSIGAHTHD FLVLSYAHLA HGTVHIDERT WTVSDGDLFV IAPGQVMSAG DPFEEATTDG
WTVWFPADVV RPGMPGAYSS WRTHPLLFPF AQGANRAQRL PVPPVDRADL VERFAALDAE
LRARRDGHQE AALAHLTLLL VTVARLSTGL ADHLRCADEP LLAAVFEAIE ERYHQPISLA
DIAADLALTA GYLTTVVRRK TGRTVTQWIA QRRMQQARLL LAETDLAVGA ISRRVGYPDT
SYFSKRFRAR HGVTPTQWRA TSPPTG
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