| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0177 |
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| Symbol | |
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| ID | 5056610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 192982 |
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| End bp | 196680 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472444 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001157040 |
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| Protein GI | 145592743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.151114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCGC ACCGCCCGCC AGAAGTTCAT GATCCTGCGA CGGACCAGGT ACCCGGTGCG
GCGCCGTTGC TGGCTGCTCG GCGCTTCCTC CGCCGGGAGC TGGTCGGTGA CCACGGCCGG
ACACTGCACC AGATAGCTGA CGGTGACTGG GACCGGTTCT ACCGCGACCA GTGGCGTTAC
GACCGGGTGG TGCGCTCCAC CCACGGCGTC AACTGCACCG GCTCGTGCTC GTGGAACGTC
TTTGTCAAAG ACGGCCTGAT CACCTGGGAA CACCAGGCCA CCGACTACCC CACGACCGGC
CCGGACTCGC CGGACTACGA GCCGCGTGGC TGTCCCCGCG GTGCCTCCTT CTCCTGGTAC
GAGTACTCGC CCTCCCGGGT GCGCCACCCC TACGTACGGG GGGTGCTGGC CGAGATGTTC
CGCGACGGGC TCGCGCGCCT GGGCGATCCG GTGTCCGCCT GGGCCGACAT AGTGGAGAAC
CCACTCAAGG CGCGCGCCTA CAAGACCCAG CGGGGACGTG GCGGCTTTGT GCGCGCCAGT
TGGGACGAGG TGACCACGAT GGTCGCCGCC GCGCACGTGT ACACCACGAA GACGTACGGG
CCGGACCGGG TGGTGGGCTT CTCGCCGATT CCGGCGATGT CGATGGCGTC CTTCGCCGCC
GGCACCCGTT ACCACGCCCT GCTCGGTGGC ACCCTGCTGA GCTTCTACGA CTGGTACGCC
GACCTGCCGA TCGCCTCGCC GCAGATCTGG GGTGACCAGA CCGACGTGCC CGAGGCCGGC
GACTGGTGGA ACGCCACCTA TCTGATGATG TGGGGCTCGA ACATTCCGGT CACCCGTACT
CCGGACGCCC ACTTCCTGGC CGAGGCCCGC TACCGGGGCA CGAAGGTCGT CGCGGTCAGC
CCGGACTACG CCGACAACGT CAAGTTCGCC GACGACTGGC TTGCCCCGCA CCCGGGTACC
GACGGTGCGC TGGCGATGGC GATGGGCCAC GTCGTGCTCA CCGAGTTCTT CCGGGACCGC
ACGGTTGACT ACTTCACCGA CTACGTTCGC CGCTTCACCG ACCTGCCGTT CCTGGTCACG
CTGCGACCGA CCGCAGGTGG CCGGTGGGCT ACGGACCGTT TCCTCACCGC AGCAGACCTG
GGCCAGGAGG ACGGAGCGCA CAAGACCGTC CTGGTTGACG AGCACACCGG CGAACTGGTC
GTGCCGAACG GGTCGCTGGG CTTCCGGTAC GGCGAGGCCG GCCAGGGGCG CTGGAACCTC
GACCTGGGCG AGGTGTTCCC CGCTCTTGGG CTGCTCGACC GGAGCGACGA GGCGATCGAG
GTCGAGCTGG CTCGCTTCGA CGTCGGAGAG ACCGAGGGTG GGTCCACCAT CAGCCGCGGC
GTGCCGGTCA TGAGGGTCGG CGAGCAGCTG GTCACCTCGG TCTACGACCT GGTGCTGGCG
CAGTACGGGG TGCGCCGCGG CGACCTGCCG GGGCAGTGGC CGACCGGCTA TGACGACCCG
GAATCCCCGA ACACGCCGGC CTGGCAGGAG CGGATCACCG GGGTACCGGC CGCGGTGGCC
ACCCGGATCG GCCGGGAGTT CGCCCGCAAC GCCGAGCGCA GCCAGGGGCG GTCGTTGATC
GTCCTGGGCG CCGGCGCGAA CCAGTGGTTC CACTCCGACA TGACCTACCG GGCGCTCATC
TCCCTGGTCA CCCTGACCGG CTGCCAGGGT GTCAACGGCG GCGGCTGGGC GCACTACGTC
GGGCAGGAGA AGGCCCGCCC GATCACCGGC CAGCAGCACA TGTCCTTCGG GCTCGACTGG
CAACGGCCGA TGCGACACCA GGCGAGTACG CCGTTCTGGT ACCTGCACAC CGACCAGTGG
CGGTACGAGC GGGTCCCGGT CGACGAGTTG TCCTCCCCGT TGGGCACCGG CCGGTTCGCC
GGGATGGCCT TCGCCGACAC CGTCGCCGCC GCGCAGCGGA TGGGCTGGAG CCCCGGCCAC
CCGTCGTTCA ACCGCAACCC GCTCGACCTC ACCGACGAGG CGGCGGCGGC CGGGGTGACG
GTGCAGGAGC ACATCGTCGC CGAGCTGAAG GCCGGCCGGC TACGGTCGGT GGCGGAGGAC
CCGGACGATC CGGCGAACTT CCCGCGCTGC CTCACGCTGT GGCGGGCGAA CCTGCTCGGC
TCCTCCGGCA AGGGCAACGA GTACTTCCTG CGCCATCTGC TGGGGATCGA CTCGACCGCC
ACCGCCTCGG AGTGCGACCC GGAGCACCGA CCCCGGGACC TCGTGTGGCG AGATGAGGCG
CCGACAGGGA AGCTTGACCT GCTCACGGCG ATCGACTTCC GGATGACCAA CACCGGTCTG
CACGCCGACG TGGTGCTGCC CACCGCAACC TGGTACGAGA AGCACGACAT CTCCACCACG
GACATGCACC CGTTCGTGCA CGCGTTCAGC CCGGCGGTGG AGCCGCCCGC CGACGCCCAC
TCCGATTACG ACACCTTCCT GGCGCTCGCC GACCGGTTCA GTGAGCTGGC CGCCGGCCAC
CTGGGCGTGC GGCGGGACGT GCTGGCCGCG CCGCTGCAAC ACGACACACC AGACGAGTTG
GCCATGCCCA GCGGGCGGGT GCGGGACTGG AAGGCTGGCG AGTGCGAGCC GATCCCCGGC
GCCACCATGC CGAAGCTCAT CGAGATCGAG CGGGACTACT CCCAGATCGG CGCGAAGATG
CGTGCCGTTG GCCCGCTACT CGACCGGCTC GGCACCAGCA CGAAGGCGCT CACCGTGGAC
GTGACCGTGG AGCTGGCGTA CCTGCGGGAG CGGAACGGGG TCGTCCCTGA CGGGCCGTTC
GCCGGCCGGC CGTCGCTGGC CACCGCCGAT CGGATGTGCG AGGCGATCCT GGCGCTGTCG
GGCACCACGA ACGGTCGGGT TGCCGCGGCC GGTTTCGCGG CACTGGAGAA GCGGACCGGT
CAACCGTTCG CGGATCTGAT CGCCGGCCAC GAGAACGACC AGATCACGTA CGCGGACACC
CAGCGGGCGC CGCAGTCGGT CTTCACCAGC CCGGAGTGGT CCGGCTCGGA GAAGGGAGGC
CGTCGCTACT CACCCTTCAC CCTCAATGTG GAGCGGCTCA AGCCGTGGCA CACCATCACC
GGCCGGCAGC ACTTCTTCGT GGAGCACGAC TGGGTGGCGG AGTTGGGCGA GCAGTTGCCG
GGCTTCCGAC CCCCGCTGAA CATGGCCCGG CACTTCGGCG CGCCCGGTGA GTTGGTCGAT
GGCGGCGTCA CCGTACGTTT CCTGACCCCA CACGCGAAGT GGACGATCCA CTCGATGTAC
CACGACAACG AACTGATGTT GGCGTTGTCG CGAGGTGGGC CGGTGATCTG GATGAGCGTG
CCCGACGCCG CGAAGGTCGG CGTACGGGAC AACGACTGGG TGGAGGCGCA CAACCGCAAC
GGAGTCATCG TGGCCCGAGC GGTGGTCAGT CACCGGATGC CGGAGGGCAC GGTGTTCCAG
TACCACTCGC CGGAGCGGAC GATCAACGTG CCCAAGGCGG AGAAGAGCGG TCGCCGGGGC
GGCTACCACA ACTCGTTGAC CCGGCTGCTG GTCAAGCCCA CCCATCTGGC CGGCGGACAC
GCCCAACTCA CCTACGCCTT CAACTACTAC GGCCCGATCG GCAGCCAACG CGACGAGATC
ACGGTGATCC GCCGCCGCGA CCAGGAGGTG GAGTACTGA
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| Protein sequence | MSAHRPPEVH DPATDQVPGA APLLAARRFL RRELVGDHGR TLHQIADGDW DRFYRDQWRY
DRVVRSTHGV NCTGSCSWNV FVKDGLITWE HQATDYPTTG PDSPDYEPRG CPRGASFSWY
EYSPSRVRHP YVRGVLAEMF RDGLARLGDP VSAWADIVEN PLKARAYKTQ RGRGGFVRAS
WDEVTTMVAA AHVYTTKTYG PDRVVGFSPI PAMSMASFAA GTRYHALLGG TLLSFYDWYA
DLPIASPQIW GDQTDVPEAG DWWNATYLMM WGSNIPVTRT PDAHFLAEAR YRGTKVVAVS
PDYADNVKFA DDWLAPHPGT DGALAMAMGH VVLTEFFRDR TVDYFTDYVR RFTDLPFLVT
LRPTAGGRWA TDRFLTAADL GQEDGAHKTV LVDEHTGELV VPNGSLGFRY GEAGQGRWNL
DLGEVFPALG LLDRSDEAIE VELARFDVGE TEGGSTISRG VPVMRVGEQL VTSVYDLVLA
QYGVRRGDLP GQWPTGYDDP ESPNTPAWQE RITGVPAAVA TRIGREFARN AERSQGRSLI
VLGAGANQWF HSDMTYRALI SLVTLTGCQG VNGGGWAHYV GQEKARPITG QQHMSFGLDW
QRPMRHQAST PFWYLHTDQW RYERVPVDEL SSPLGTGRFA GMAFADTVAA AQRMGWSPGH
PSFNRNPLDL TDEAAAAGVT VQEHIVAELK AGRLRSVAED PDDPANFPRC LTLWRANLLG
SSGKGNEYFL RHLLGIDSTA TASECDPEHR PRDLVWRDEA PTGKLDLLTA IDFRMTNTGL
HADVVLPTAT WYEKHDISTT DMHPFVHAFS PAVEPPADAH SDYDTFLALA DRFSELAAGH
LGVRRDVLAA PLQHDTPDEL AMPSGRVRDW KAGECEPIPG ATMPKLIEIE RDYSQIGAKM
RAVGPLLDRL GTSTKALTVD VTVELAYLRE RNGVVPDGPF AGRPSLATAD RMCEAILALS
GTTNGRVAAA GFAALEKRTG QPFADLIAGH ENDQITYADT QRAPQSVFTS PEWSGSEKGG
RRYSPFTLNV ERLKPWHTIT GRQHFFVEHD WVAELGEQLP GFRPPLNMAR HFGAPGELVD
GGVTVRFLTP HAKWTIHSMY HDNELMLALS RGGPVIWMSV PDAAKVGVRD NDWVEAHNRN
GVIVARAVVS HRMPEGTVFQ YHSPERTINV PKAEKSGRRG GYHNSLTRLL VKPTHLAGGH
AQLTYAFNYY GPIGSQRDEI TVIRRRDQEV EY
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