Gene Strop_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0167 
Symbol 
ID5056600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp180519 
End bp180980 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID640472434 
Producthypothetical protein 
Protein accessionYP_001157030 
Protein GI145592733 
COG category[K] Transcription 
COG ID[COG1510] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.287681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG AGGCTGGCCG GCGGTACGCC GAGGAGGTCG GCGTCGTCCT GGCTCGGATG 
GGCACCACAC CCGCCTTCGG CAAGCTACTG GGCTGGCTGC TCATCTGCGA CCCGCCGAGA
CAGACCACCG CGCAGTTGTG CGAGGCGATG GGGCTGTCCA AGGCCTCGGT ATCCACCGGC
ATGCGGGTGC TGGAACAGTC CGGCATGGTC CGACGGGTGC CGAGCCAGGG CCGGGGACAC
GCGTACGAGA TGCATCCGGA CGCCTTCGCC CGTGCCATTG ACCCAACCGA CAGGATGCGC
GTTTTCATCG ATCTGATGCA GCGCGGTATC GATCTGGTCG GCGACGCGGC GGCACCGGAG
GCCAGCCGGT TACGCCATAC CCGCGACTTC TACACCTTCA TGGTCGAGCG CACACCAGCC
CTGATGGAAG AGTTCCGTCG ACAAGCACGA AAGGGCAGCT AG
 
Protein sequence
MDPEAGRRYA EEVGVVLARM GTTPAFGKLL GWLLICDPPR QTTAQLCEAM GLSKASVSTG 
MRVLEQSGMV RRVPSQGRGH AYEMHPDAFA RAIDPTDRMR VFIDLMQRGI DLVGDAAAPE
ASRLRHTRDF YTFMVERTPA LMEEFRRQAR KGS