| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0165 |
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| Symbol | |
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| ID | 5056598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 178292 |
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| End bp | 179626 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472432 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001157028 |
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| Protein GI | 145592731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.503783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCT CACGCGCCGC GCGAGCTGCC ACCCTGGCCG CCTGTGCGAC GTTCCTACTC
GCCAGCAGCG CCTGCGGGAC CGACGAGTCC GACCAGGTCA CCGCTAGCCC GGTACGCCTC
TACGGCACCG ACGGCACCAT GCTCAACTCG TTCCCCACCG AGTTGGGGGA CCGGGCCGAC
CTGGTCGACG GGATGAAGGG CACCACACCG CTGACCCCGC TGCCGGAGGA CTTCAAGGAC
CGGTTGCGTT CGATTGACCC TGACCTGACC AGCTTCGTCT ATGCGGCGGA GACCTACGAC
GCGGTGCTGA TCAGCGCGCT CGCGGCGCAA CTCGCCGGCA CCACCGATCC GGCGGCTGTC
GCGGAACAGA TCGTCGGGAT CACCAACGGC GGCCAGCGGT GTGAGACCGC CGTTACCTGC
CTCGCGCTGG CCCGAGACAG ACAGGACATC GAATACCGCA GCGTCTCGAT CACCCGAGGT
GGATTCACCG CGGCCGGCGA GCCTTCCACC GCCAGCTACG CCACTCTGCA CTTCGACGGA
AAGCAGATCA ACGACGCCAA GACGGAGTTC CTCGGTGCGG GCTTCGAGTC GACCGCGAGC
AACTCGCCGC CACCGGATGC CGCGAGGGCC GGCCGGAACG GTAAAGCCCC GCTGGTGCTG
GGGGGCCTGC TACCGCAGAC CGGTGACCTC GCGCTGTCCA ACCCGCCCCT CGCCGCCGGC
GCTGCCCTCG CAATTCAGGA GATCAACGCC GCTGGTGGCG TCCTTGGCGC CCCGGTCACC
TGGATCGACG GCGATGACGG CACGAATCCG ACGGTCGCCA AGGCGACCGT GGCGCGCCAT
GCCGCCGCCG GCGTCCACGT CATCATCGGC GCTGGCGCGT CCGGCATCTC CCGGGCAGTG
CTACCCGACG TGGTACGGGC CGGGCTGGTG CTGTTCTCCC CGTCGAACAC CGACGCGAGC
CTCACTGAAC TGGACGACGA GGGCCGCTAT TTCCGAACCG CCCCACCCGA CAGCTTGCAG
GGCCGCGCGC TGGCCGACGT TATCTTGCGG GACGGCCCGC AGCAGATCGC CATCGTGGCC
CGGCAGGACT CCTACGGCGA GGGCCTACAG AACATCGTGC AGTCCGAGCT GGAACGGGCC
GGCGTCGACC CGGACCGACT CAAGCTGATC ACGTACCAAC CACCGGAGGG CACCGACGTA
GCAGCGGTCG ACTTCGCCTC CGGTGTCCGC GAGATCAAGG AATCTGGAGC CGACGCTGTC
CTGATCATCG GGTTCAGTGA GTCGGCCGAG CTGATCCGGG CCCTCGCCGA CGCGGGGGTA
CCGCTGCACC ACTGA
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| Protein sequence | MLISRAARAA TLAACATFLL ASSACGTDES DQVTASPVRL YGTDGTMLNS FPTELGDRAD
LVDGMKGTTP LTPLPEDFKD RLRSIDPDLT SFVYAAETYD AVLISALAAQ LAGTTDPAAV
AEQIVGITNG GQRCETAVTC LALARDRQDI EYRSVSITRG GFTAAGEPST ASYATLHFDG
KQINDAKTEF LGAGFESTAS NSPPPDAARA GRNGKAPLVL GGLLPQTGDL ALSNPPLAAG
AALAIQEINA AGGVLGAPVT WIDGDDGTNP TVAKATVARH AAAGVHVIIG AGASGISRAV
LPDVVRAGLV LFSPSNTDAS LTELDDEGRY FRTAPPDSLQ GRALADVILR DGPQQIAIVA
RQDSYGEGLQ NIVQSELERA GVDPDRLKLI TYQPPEGTDV AAVDFASGVR EIKESGADAV
LIIGFSESAE LIRALADAGV PLHH
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