Gene Strop_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0161 
Symbol 
ID5056594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp175631 
End bp175840 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content68% 
IMG OID640472428 
ProductDNA binding domain-containing protein 
Protein accessionYP_001157024 
Protein GI145592727 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.177228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC GAACGCACGA ACCGGAGCCG CTGCTCACGC CGGCCGAGGT GGCGTCGATG 
TTCCGTGTCG ACCCGAAAAC GGTGACCCGT TGGGCCAAGG CCGGAAAGCT GAGTGCGATC
CGGACCCTCG GCGGGCACCG CAGATACCGG GAATCGGAGG TCAGAGCGCT GTTGCAGGGG
CAGATCCCCC AGCAGCGCCA GGGGGACTGA
 
Protein sequence
MASRTHEPEP LLTPAEVASM FRVDPKTVTR WAKAGKLSAI RTLGGHRRYR ESEVRALLQG 
QIPQQRQGD