| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0153 |
|---|
| Symbol | |
|---|
| ID | 5056586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 165584 |
|---|
| End bp | 167938 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472420 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157016 |
|---|
| Protein GI | 145592719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGGG CCCGAGACAC ACTGCACTGC GCCGTAGGGT GGCACCCGCA CCTCCACCGA
TCGACCGGGT ACCCGCTCCG CGAGCACGGT CAACAGGGCA CGGACCGCCG CCCGGAGTAC
CGGACGATCG GGGATACGCC CTTCATCGAA CGCCGACAGC GCCGCCACGA CTGCAGCGGT
TCTAGCGTAC GAAGGGGTCA CAGCGGGACG ATACGGCGCG CGCGCGGATG CTCTCACACC
GGCCCTGGGT CGCGCCGATC CGACTGGACA AGGCATAGTA GCCCACGGCG TATTCGTACC
GTGATGATCC CTGGCCCGGC GACCGCCGGC CACGTGGGAT TCCAGTGGAA GGCGGTGGAC
GTGTCAACAC ACCGACGTGC CTGGAAGCAG CGGGCCGGTG TGGTCGTGGC GTTGCTGGTT
GGTGCCCTGC TCACCGTCCC CGCCACCCCG GCCTCCGCCG CCCTCGGGGT CAACAATGTC
TCGGCCTCAC CGAGCCGGAT CGAGGCGGGC GGGACCACAA CGGTCAGCTA CTCGATCGAG
ATCTCGGACG ACAAGCCCGC CGACGTGACG GTGACGTCCA GCAACGGAAA GCTCACCTGC
GTCGACGGTT GCAGCCGCAG CGGCGTCAAC CAGAGTCAGG ACTTCCAGGC CAGCTTCCAG
CTGGCCAGCG ACACGACCAA CGGACAGGCC ACGATCACGG TCACCGCAGT CGACTCCGAC
GGCGAGAAGA GTCGCACTAC CAGGGTCACC CTGGTGGCCA AGCCGGAGCC AGAGCCGCAG
CCCAGCCAGG CCCAGACGGT GAAGTCGGTC TCCGGCGAGG TGGTCAATCA GAGCACCGGC
AGCGCGGTAC CGGGAGCCTT GGTCGTCCTC AGGGACTCCA GGAACAACAA GTTCGACACC
ATCACCGACA ACGGTGGGAA CTTCCGGTTC ACCGGTAGCA CCCAGAACCC GATCACCCCC
GGCCGACTCG ACATCGGCGC GAGCATGGAC GGCAGCACCG CCACCAAGAC GCTGAATGCC
TCCGCCGGGC AGAGCGTCTC CGGCCAGCGG ATCTCACTCA GGATCCAAGA AGAGCCGACC
GCGAGCCCCA GTCCGTCGAC GAGCATCGAT GCGGCACCGA CCGTTGGAGT GGATGAAGAG
ACCGAGGAGC CGATCGAAGC CGCCGTGGAT GTCCCCGTGG CGGAGGCCAG CGACGAGGGG
TCCGGCGGCA CCGGTTCACT GCTGATCATC CTGCTCGGTG GCCTTCTCGT GGCAGCCGGC
GTCGGCACCA TGGTGTTGCT GTGGCTACGC CGCAAGGAAA ACGACGACGA AGACGAGGCG
GGCGTCAACC CTTCCGGCGC GGCCACAGGT GCCGTCCCGG TTGCCCGCGG CGGCTACGGC
GGCGCCGACG ATCAGACGCG GATCGTGAAC CCGACCGCGG CGGCACCGAC GATGGTCGGC
GGGGACCCTT CCCTCGCCGA CGCTCCCACG ATGATGCACA GCCCGGTGGT CGACGATGTC
CCACCGGACC CCTACGGCGC TCCGCCGCAG CCCTATGGCG CGTCCGCCGG CCAGTCCAGC
TGGACCGACA GCGGCTACGG CGCCACGCCC CCCGCCTCCG GTGGCGGCTA CGGCGGCAGT
GACTACGGCA CGTCCTCCCC GGCTGGGACC GGCTACCCTC CCAGTTCTGG CGGGCCGTAC
GGCCACGAGG AGCGGTACGA CGAGATGACC GGCCGCTACC AGGCCGACGC CACGCAGTAC
CCGGCCCCGG CCGACCCGTA CCCCACCGGG AGGTACCAGC AGGACGCCGG CTACGGCCAG
GCCGAGCCCG CATACGGACG CGGTGCTGAG CCGACCAGTG GCTACGACCA ACAAGGCGGC
TACGACGGCC ACGGCTACGA CCAGCGCGGC GGCTACAACC AACAGGCCGG CTACAGCCAG
GACACGCCCG CACAGTACGG CGGCTACGAC CAGCACGGCG GCTACAACCA ACAGGCCGGC
TACGGCCAGG ACACACCCGC CCAATACGGC GGCTACGGCC AACAAGCCGG CTACAGCCAG
GACACACCCG CCCAATACGG CGGCTACGAC CAGCACGGCG GCTACAACCA ACAGGCCGGC
TACGGCCAGG ACACACCCGC CCAATACGCC GGCTACGGCC AACAAGCCGG CTACGGCCAG
GAGCTGCCAA CCCAACGCGG CGGCTACGAC CAACAGGCCG GCTACAGCCA GGACACACCC
GCCCAATACG GCGGCTATGA CGACCGTGGG TATGGCCAGG GCGGCTACGG GGACCCGACA
CAGACCGATC GGGCTCGGTC CGACGCTCCC CCGCCGGACC GGGGCGGTCG CCGGCTGGAC
TGGCTGGACG ACTGA
|
|---|
| Protein sequence | MPGARDTLHC AVGWHPHLHR STGYPLREHG QQGTDRRPEY RTIGDTPFIE RRQRRHDCSG
SSVRRGHSGT IRRARGCSHT GPGSRRSDWT RHSSPRRIRT VMIPGPATAG HVGFQWKAVD
VSTHRRAWKQ RAGVVVALLV GALLTVPATP ASAALGVNNV SASPSRIEAG GTTTVSYSIE
ISDDKPADVT VTSSNGKLTC VDGCSRSGVN QSQDFQASFQ LASDTTNGQA TITVTAVDSD
GEKSRTTRVT LVAKPEPEPQ PSQAQTVKSV SGEVVNQSTG SAVPGALVVL RDSRNNKFDT
ITDNGGNFRF TGSTQNPITP GRLDIGASMD GSTATKTLNA SAGQSVSGQR ISLRIQEEPT
ASPSPSTSID AAPTVGVDEE TEEPIEAAVD VPVAEASDEG SGGTGSLLII LLGGLLVAAG
VGTMVLLWLR RKENDDEDEA GVNPSGAATG AVPVARGGYG GADDQTRIVN PTAAAPTMVG
GDPSLADAPT MMHSPVVDDV PPDPYGAPPQ PYGASAGQSS WTDSGYGATP PASGGGYGGS
DYGTSSPAGT GYPPSSGGPY GHEERYDEMT GRYQADATQY PAPADPYPTG RYQQDAGYGQ
AEPAYGRGAE PTSGYDQQGG YDGHGYDQRG GYNQQAGYSQ DTPAQYGGYD QHGGYNQQAG
YGQDTPAQYG GYGQQAGYSQ DTPAQYGGYD QHGGYNQQAG YGQDTPAQYA GYGQQAGYGQ
ELPTQRGGYD QQAGYSQDTP AQYGGYDDRG YGQGGYGDPT QTDRARSDAP PPDRGGRRLD
WLDD
|
|---|
| |