Gene Strop_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0152 
Symbol 
ID5056585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp162945 
End bp165419 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content71% 
IMG OID640472419 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_001157015 
Protein GI145592718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC AGGACCCGGT CCGGGACACC TCAGACGCCG CAGCAGCCGG ACCGACGGCC 
GCGCCTGACC GAGGCGCTGC CGTCACCGGC TGGGCCGGGG GCGTGGACAC CGTCCCCCAC
GCCGGCGAGA GCCCGGACGA GCTTCAGCCC TACGTCGATC TCGGTCTCCG GGACGACGAG
TACCAGCGGA TCCGGCAGCT GCTCGGCCGT CGGCCCACCC AGGCCGAGCT GGCCATGTAC
TCGATCATGT GGAGCGAGCA CTGCTCCTAC AAGTCGAGCA AGGTTCACCT GAGGCAGTTC
GGGGAGAAGG CCCCGTCCAG CGACCGACTG CTCGCCGGCA TCGGTGAGAA CGCGGGCGTG
GTCCGGGTCT CCGACGAACT CGCGGTGACC TTCAAGGTCG AGTCGCACAA CCACCCGAGC
TTCGTCGAGC CCTACCAGGG CGCGGCGACC GGCGTCGGCG GTATCGTCCG GGACATCCTC
GCCATGGGCG CGCGCCCGGT CGCGGTGATG GACCCGTTGC GCTTCGGCGC GGCCGACCAC
CCCGACACCG CTCGCGTGCT ACCCGGCGTG GTCGCCGGGG TCGGCGGCTA CGGCAACCGC
CTCGGCCTGC CGAACATCGG CGGCGAGGTC GTCTTTGACC CCTGCTACCA GGGCAACCCG
CTGGTCAACG CCCTCTGCGT CGGGGTGTTG CCGATCGACC GACTCCAGAA CAAGGCCGCC
GCCGGCGACG GGAACGTCGT GGTGTTGATG GGCGCCAAGA CCGGCCGGGA CGGCATCGGC
GGCGTGTCGG TGCTGGCCAG CGCCACCTTC GACGAGAGCA GCGAGCAGCG TCGTCCCTCG
GTTCAGGTGG GCGACCCGTT CATCGAGAAG CTGCTCATCG AGGCCTGCCT GGAGCTCTAC
GACGAGCAGC TCGTCGTCGG TATCCAGGAC CTCGGCGGCG CCGGGCTGAC GTGTGCCCTC
GCCGAGACCG CCGCCGCCGC GGGTACCGGC ATGCGGGTCT GGCTCGAGCG GGTACCGCTG
CGGGAACCCT CGATGGAGCC GCACGAGATC CTCGCCAGCG AGTCCCAGGA GCGGATGCTG
CTGGTCGTCG AGCCGGAGAA GCTGGAGGCG GTGCTCAAGA CCGCCGAGAA GTGGGGCGTG
ATCGCCACCG CGATCGGCGA GGTCACCCCA CGGGCAGCGG ACGGGCAGCC GGGCCGCCTG
GTCGTCACCT GGCGAGACCA TCTGGTCGTT GACGTCCCAC CGGGTTCGCT GGCTGACGAC
GGTCCGGTGT ACAACCGGCC GATGCGGGAG CCGGCCGACC TGATCCTGCT CCAGGCCGAC
CGGGCGGAGA CCCTGCCCCG GCCGAGTGAC CCGGAGGCCC TACGGGAGAC GGTCCTGCGG
ATGATCGCCT CGCCGAACCT CGCGGACAAG ACCTGGGTCA CCGAGCAGTA CGACCGGTAC
GTGCTGGGCA ACACCGTGCT CGCCCAGCCC GAGGACTCGG GCGTGATCCG GATCGACGAG
CGCAGTGGTG TCGGCATCGC GCTCTCCGTC GACGGCAACG GCCGCTACGC CCGCCTCGAC
CCGTACCACG GTGCCAAGCT CGCGCTGGCC GAGGCGTACC GGAACGTGGC CGTGACCGGT
GCCAAGCCGA TCGCCGTCAC CGACTGTCTC AACTTCGGCT CCCCGGAGGA CCCGGGCGTG
ATGTGGCAGT TCGCCGAGGC CGTCCGGGGC ATCGCCGACG GCTGTAGCGA GCTGGATATC
CCGGTTACCG GGGGTAACGT CAGCTTCTAC AACCAGACCG GCGCGGCAGC CATCCATCCG
ACCCCGGTGG TGGGCGTCCT TGGCGTGCTG GACGACGTGG CCGACCGGGT CCCGATGGGC
TTTGTCCCGC GTGACGGCGG TCATGACCAG ATCTACCTGC TGGGTGAGAC GCACGTGGAG
TTGTCCGGCT CGGAGTGGGC GTGGGCCACC CACGAACACC TCGGCGGCGT ACCTCCCCGG
GTGGACCTTG ACCGCGAGCG GGCGATCGCC GACCTGATGG CGGTGGCGGC CCGGGGCGGG
CACCTCAGCT CCGCGCACGA CCTCTCCGAC GGCGGTCTCG CGCAGGGCCT GGTCGAGTCC
TGCCTGCGTC AGGGCGTCGG CGCCCGGGTG ACCCTGCCGG AGCAGTTCAC CGGCGGCTCG
ATGCCGTTCG TCTTCCTGTT CAGCGAGTCC GCTGGCCGGG TGTTGGTCTC GGTGCCGCGG
GGGCACGAGA AGGCGTTCAC CGCGCTGGCC GCCGAGCACG GCGTGCCGTG CGAGCTGATC
GGTGTCACCG ACCCGGCCGC TGGTGCGCTG GAGGTGCACG GGCAGTTCCG CCTCAGTCTG
GCGGAGCTGC GCGCGGCGCA CAGCGCTACC CTGCCCCGCC TCTTCGGCGG AGCGGAACTC
GCCACCTCGC CGGTCGACAC GGCGACGCCG GCCAGCTCCG AGCCACAGCC TGGGGGACCG
AGCGAACAGG CGTGA
 
Protein sequence
MTTQDPVRDT SDAAAAGPTA APDRGAAVTG WAGGVDTVPH AGESPDELQP YVDLGLRDDE 
YQRIRQLLGR RPTQAELAMY SIMWSEHCSY KSSKVHLRQF GEKAPSSDRL LAGIGENAGV
VRVSDELAVT FKVESHNHPS FVEPYQGAAT GVGGIVRDIL AMGARPVAVM DPLRFGAADH
PDTARVLPGV VAGVGGYGNR LGLPNIGGEV VFDPCYQGNP LVNALCVGVL PIDRLQNKAA
AGDGNVVVLM GAKTGRDGIG GVSVLASATF DESSEQRRPS VQVGDPFIEK LLIEACLELY
DEQLVVGIQD LGGAGLTCAL AETAAAAGTG MRVWLERVPL REPSMEPHEI LASESQERML
LVVEPEKLEA VLKTAEKWGV IATAIGEVTP RAADGQPGRL VVTWRDHLVV DVPPGSLADD
GPVYNRPMRE PADLILLQAD RAETLPRPSD PEALRETVLR MIASPNLADK TWVTEQYDRY
VLGNTVLAQP EDSGVIRIDE RSGVGIALSV DGNGRYARLD PYHGAKLALA EAYRNVAVTG
AKPIAVTDCL NFGSPEDPGV MWQFAEAVRG IADGCSELDI PVTGGNVSFY NQTGAAAIHP
TPVVGVLGVL DDVADRVPMG FVPRDGGHDQ IYLLGETHVE LSGSEWAWAT HEHLGGVPPR
VDLDRERAIA DLMAVAARGG HLSSAHDLSD GGLAQGLVES CLRQGVGARV TLPEQFTGGS
MPFVFLFSES AGRVLVSVPR GHEKAFTALA AEHGVPCELI GVTDPAAGAL EVHGQFRLSL
AELRAAHSAT LPRLFGGAEL ATSPVDTATP ASSEPQPGGP SEQA