Gene Strop_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0137 
Symbol 
ID5056570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp148966 
End bp149418 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID640472404 
Productsterol-binding domain-containing protein 
Protein accessionYP_001157000 
Protein GI145592703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.558508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT TCGACCCGGC CAAATTTGCC AACGTCGGCC CCAAGGAGTT CGCGCAGCTG 
GTCAAGTCCA CCCCCGACGA CAAGATCACC GAGATGATGT CGGGTGACCT CCGCGGCAAG
GTTCTCGACG AGGTCTTCGG CCGGATGCCG CAGCTGTTCC GCGCCGACCG GGCGGGCTCG
ACCAACACGG TCATTCACTG GAACATCACC GGCGGTCCCG ACGGGGGCAC CGACACCTAC
GAGGTGGTCA TCGCCGACGG TGCCTGCACC GTTAACCAGA CCTCCCAGCA CGACCCGAAG
CTGAGCCTCA CCCTGGGTCC GGTGGAGTTC CTCAAGACCG TCTCCGGCGG CGCCAACCCG
GTCATGATGT TCATGAGCGG CAAGTTGAAG GCCAAGGGCG ACCTGGGACT GGCCGCCAAC
ATCGCGAACC TCTTCGACAT TCCCAAGGCC TGA
 
Protein sequence
MTDFDPAKFA NVGPKEFAQL VKSTPDDKIT EMMSGDLRGK VLDEVFGRMP QLFRADRAGS 
TNTVIHWNIT GGPDGGTDTY EVVIADGACT VNQTSQHDPK LSLTLGPVEF LKTVSGGANP
VMMFMSGKLK AKGDLGLAAN IANLFDIPKA