| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0127 |
|---|
| Symbol | |
|---|
| ID | 5056560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 135831 |
|---|
| End bp | 136544 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640472394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001156990 |
|---|
| Protein GI | 145592693 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACGC CCACCACTAC CCTGGCTCTC GGGCCGGACT GGCTCGATCC CGAGGTGCTG
ATCTCGACCT TCGGCCTGCT CGGCATCCTG GTGATCGTCT TTGCCGAGTC TGGGCTACTG
ATCGGCTTCT TCCTGCCCGG TGACTCGCTG CTGTTCACCG CCGGCCTGCT CACCGCCGAC
GGGAAGTACA TCACCTGGCC GCTCTGGCTG GTCTGTCTGC TCATCACGCT GTCGGCCATC
GCCGGTGACC AGGTCGGGTA CGCCTTCGGG CGCAAGGTCG GGCCGGCGCT GTTCCGGCGA
CCCAACTCGA AGCTGTTCAA GCAGGAGAAT CTGCTGAAGT CACACGACTT CTTCGAGAAG
TACGGAGCCC GCTCGGTCGT GCTGGCCCGC TTCGTACCGA TCGTCCGGAC GTTCACCCCG
ATCGTGGCCG GGGTCAGCCG GATGAACTAC CGCACGTTCG TCATCTACAA CGTGATCGGC
GCGATCCTCT GGGGCACCGG CGTGACGGTG CTCGGCTACT TCCTCGGCCA GATCCCGTTC
GTGAAGGCGA ACATCGAGCT GATCCTGATC GCGATCGTGG GGCTCTCGGT GGTCCCGATC
GTGGTCGAGT TGCTGCGAGC CCGTCTGGCG GCGAGGCGCG GCACCACCGC GGCGGAGCGG
GCCGCCGCCG AGGAGGCGAT CCGGGAAACC CGGGAGCACT ACGGCAAGTA CTGA
|
|---|
| Protein sequence | MSTPTTTLAL GPDWLDPEVL ISTFGLLGIL VIVFAESGLL IGFFLPGDSL LFTAGLLTAD
GKYITWPLWL VCLLITLSAI AGDQVGYAFG RKVGPALFRR PNSKLFKQEN LLKSHDFFEK
YGARSVVLAR FVPIVRTFTP IVAGVSRMNY RTFVIYNVIG AILWGTGVTV LGYFLGQIPF
VKANIELILI AIVGLSVVPI VVELLRARLA ARRGTTAAER AAAEEAIRET REHYGKY
|
|---|
| |