Gene Strop_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0122 
Symbol 
ID5056555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp132049 
End bp133014 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID640472389 
Producthypothetical protein 
Protein accessionYP_001156985 
Protein GI145592688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGC TGCAACGGAT CCGCCAGCAG GCAGTCGGCA GTGCGGTCGC GCGCTGGTTC 
GCGCGGTGTG AGGTGCTCGT GCGGGGTGCC GGGGACGGGC TCGCGGTTCG GGAACTGCTG
CGCTACCCGG ATGTACGTCG GATCACCGTG GGAGCCTCGT ATCGTCGAGC TTGTTGCCCG
AGGTCGTACG GTGTGGGCGC GAATGAGGGA AGGAGACTCG TGGCAAATCC GCAACAGCCC
GTACGGGTAC GTCCGGGCGT CGTAACCATT TCCAGTTATC TACTTATTTT CTATGCCGTC
CTGACCGCGA TCGCCGTGGT CGTTGGGCTC GCCACCCTGG GTACGCTGCA GGACGTCTAC
CAGGAGTCCT TTGCTGGGAC CGATGCCGAG GGCGCCGAAG GCTTCGTGGT GCTCGTGGCC
GTCGCGACGA GCCTGGTCAG CCTGCTCTTC GCGGTGGGGC TGGTCGTTCT CGCCCTGCTC
AACAACCGGG GAAAGAACAC GCCCCGGATC ATCACCTGGG TTGTCGGCGG CATCGCGCTC
TGCTGCGCCG GGGTCGGCCT GGCCTTCTCC GCGGCGGGTA GCGCCGTAGA TGGCGAGGGC
TCCGGAGACG TGGTCAGTCA GGAGGAGATC AACCGTCGGC TGGAAGAAGC CCTGCCGTCC
TGGTACGAAC CGGTAACGAA CCTGATCACG GTGCTCGGCG CCATCGCCCT GTTGGTGGCT
CTGATCCTGC TCGCGCTGCC GAAGTCGAAC GAGTTCTTCC GCAAGCCGCA GCAGCAGTGG
GAGCCCCCGG TCCCGGGCGC TGTCTACCCC GGGACCCCGG GCGGGCCGGC GTACCCCATG
ACCCCGGGGC AGCCGGGCTA TCCGCAGGCC GATCCGAGTT CGGGTTCCTC GGGGCAGTCT
GGCTCCCCGG GGCAGTCTGG CTCCTCGGGG CACTCGGGTT CGTCAGACCC GGGTGGAGAG
AGGTAG
 
Protein sequence
MVLLQRIRQQ AVGSAVARWF ARCEVLVRGA GDGLAVRELL RYPDVRRITV GASYRRACCP 
RSYGVGANEG RRLVANPQQP VRVRPGVVTI SSYLLIFYAV LTAIAVVVGL ATLGTLQDVY
QESFAGTDAE GAEGFVVLVA VATSLVSLLF AVGLVVLALL NNRGKNTPRI ITWVVGGIAL
CCAGVGLAFS AAGSAVDGEG SGDVVSQEEI NRRLEEALPS WYEPVTNLIT VLGAIALLVA
LILLALPKSN EFFRKPQQQW EPPVPGAVYP GTPGGPAYPM TPGQPGYPQA DPSSGSSGQS
GSPGQSGSSG HSGSSDPGGE R