Gene Strop_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0119 
Symbol 
ID5056552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp127487 
End bp128692 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID640472386 
Productsodium/hydrogen exchanger 
Protein accessionYP_001156982 
Protein GI145592685 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.714442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA CGACCACACT GCTCATCGAA GTCGGGGCGC TGCTGTTCCT GCTCGGGCTA 
CTCGGCCGGC TCAGCCGACG AATCGGACTC TCCCCCATCC CCCTCTACCT GTTGGCCGGG
CTCCTCTTCG GGCACGGCGG AGTCTTTGGC TTCAAGGCCA GCGAGGAGTT CTTCGCGATC
GGCGCCGAGA TCGGCGTGAT CCTCCTGCTG GTCATGCTCG GCCTGGAATA CTCCGCCAGC
GAGCTGGTCG GCAACCTCCG CGCCGCGGCA CCGGCCGGGC TGATCGACGG GCTGCTCAAC
GCACTGCCCG GCGCCGCCTT CGCACTGCTG CTCGGCTGGG ACTGGGTAGC TGCGATCGTG
CTCGCCGGAA TCACCTGGAT CTCGTCCTCC GGCGTGGTCG CGAAGGTCCT CAGTGACCTG
GGCCGGCTCG GCAACCGGGA GACCCCGGTG GTGTTGTCGG TGCTGGTCAT CGAAGACCTG
GCAATGGCCT TCTACCTGCC GCTGCTCACC GCCGTCCTGG CCGGGGCCGG GCTGGTCGCT
GGCGGTGCCG CGCTCGCCGT CGCGGTCGCC ACGGTGCTGA TCGTGCTGGT GGCCGCGATC
CGGTATGGCC GGACCATCTC GAACATCATG TCGGCCCGCG ATCCGGAGGC GCTCCTCCTG
GGCGTGCTCG GCCTGACCCT GCTGGTCGCC GGGGTGGCCG CAAAGCTCCA GGTCTCGGCC
GCGGTTGGCG CGTTCCTGGT CGGCATCGCG ATCTCCGGGC CGGTCGCGCA CCACGCCACC
GAACTCCTGA CGCCACTGCG GGACCTGTTC GCCGCGGTGT TCTTCCTCTT CTTCGGGCTG
GTCACCGACC CGCGCGACAT CCCGCCGGTG CTGCTGCCGG CGCTCGCGCT GGCGGTGGTG
ACGATGGCCA CGAAGACACT CACCGGGTAC CTCGCCGCCC GACGGGCGGG CATCGCCGAG
CCAGGTCGCT GGCGCACCGG GCTGACCCTG GTGCCGCGCG GAGAGTTCTC CATCGTCATC
GCCGGGCTGG CGGTGGCGGC CGGAAGTGTC GATCCACAGC TGGCTGCGCT CGCCACGGCG
TATGTGTTGA TCACCGTGAT CGTCGGGCCG ACCCTCGCCC GGGTGCCCGA CCTCGACTGG
TTCAAGGGCT GGCTGCGGCA ACGCGCCGCC AAACAGCAGG CCCACCCGAT GCCCGTCGGG
GACTGA
 
Protein sequence
MHDTTTLLIE VGALLFLLGL LGRLSRRIGL SPIPLYLLAG LLFGHGGVFG FKASEEFFAI 
GAEIGVILLL VMLGLEYSAS ELVGNLRAAA PAGLIDGLLN ALPGAAFALL LGWDWVAAIV
LAGITWISSS GVVAKVLSDL GRLGNRETPV VLSVLVIEDL AMAFYLPLLT AVLAGAGLVA
GGAALAVAVA TVLIVLVAAI RYGRTISNIM SARDPEALLL GVLGLTLLVA GVAAKLQVSA
AVGAFLVGIA ISGPVAHHAT ELLTPLRDLF AAVFFLFFGL VTDPRDIPPV LLPALALAVV
TMATKTLTGY LAARRAGIAE PGRWRTGLTL VPRGEFSIVI AGLAVAAGSV DPQLAALATA
YVLITVIVGP TLARVPDLDW FKGWLRQRAA KQQAHPMPVG D