Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0119 |
Symbol | |
ID | 5056552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 127487 |
End bp | 128692 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472386 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001156982 |
Protein GI | 145592685 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.714442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACA CGACCACACT GCTCATCGAA GTCGGGGCGC TGCTGTTCCT GCTCGGGCTA CTCGGCCGGC TCAGCCGACG AATCGGACTC TCCCCCATCC CCCTCTACCT GTTGGCCGGG CTCCTCTTCG GGCACGGCGG AGTCTTTGGC TTCAAGGCCA GCGAGGAGTT CTTCGCGATC GGCGCCGAGA TCGGCGTGAT CCTCCTGCTG GTCATGCTCG GCCTGGAATA CTCCGCCAGC GAGCTGGTCG GCAACCTCCG CGCCGCGGCA CCGGCCGGGC TGATCGACGG GCTGCTCAAC GCACTGCCCG GCGCCGCCTT CGCACTGCTG CTCGGCTGGG ACTGGGTAGC TGCGATCGTG CTCGCCGGAA TCACCTGGAT CTCGTCCTCC GGCGTGGTCG CGAAGGTCCT CAGTGACCTG GGCCGGCTCG GCAACCGGGA GACCCCGGTG GTGTTGTCGG TGCTGGTCAT CGAAGACCTG GCAATGGCCT TCTACCTGCC GCTGCTCACC GCCGTCCTGG CCGGGGCCGG GCTGGTCGCT GGCGGTGCCG CGCTCGCCGT CGCGGTCGCC ACGGTGCTGA TCGTGCTGGT GGCCGCGATC CGGTATGGCC GGACCATCTC GAACATCATG TCGGCCCGCG ATCCGGAGGC GCTCCTCCTG GGCGTGCTCG GCCTGACCCT GCTGGTCGCC GGGGTGGCCG CAAAGCTCCA GGTCTCGGCC GCGGTTGGCG CGTTCCTGGT CGGCATCGCG ATCTCCGGGC CGGTCGCGCA CCACGCCACC GAACTCCTGA CGCCACTGCG GGACCTGTTC GCCGCGGTGT TCTTCCTCTT CTTCGGGCTG GTCACCGACC CGCGCGACAT CCCGCCGGTG CTGCTGCCGG CGCTCGCGCT GGCGGTGGTG ACGATGGCCA CGAAGACACT CACCGGGTAC CTCGCCGCCC GACGGGCGGG CATCGCCGAG CCAGGTCGCT GGCGCACCGG GCTGACCCTG GTGCCGCGCG GAGAGTTCTC CATCGTCATC GCCGGGCTGG CGGTGGCGGC CGGAAGTGTC GATCCACAGC TGGCTGCGCT CGCCACGGCG TATGTGTTGA TCACCGTGAT CGTCGGGCCG ACCCTCGCCC GGGTGCCCGA CCTCGACTGG TTCAAGGGCT GGCTGCGGCA ACGCGCCGCC AAACAGCAGG CCCACCCGAT GCCCGTCGGG GACTGA
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Protein sequence | MHDTTTLLIE VGALLFLLGL LGRLSRRIGL SPIPLYLLAG LLFGHGGVFG FKASEEFFAI GAEIGVILLL VMLGLEYSAS ELVGNLRAAA PAGLIDGLLN ALPGAAFALL LGWDWVAAIV LAGITWISSS GVVAKVLSDL GRLGNRETPV VLSVLVIEDL AMAFYLPLLT AVLAGAGLVA GGAALAVAVA TVLIVLVAAI RYGRTISNIM SARDPEALLL GVLGLTLLVA GVAAKLQVSA AVGAFLVGIA ISGPVAHHAT ELLTPLRDLF AAVFFLFFGL VTDPRDIPPV LLPALALAVV TMATKTLTGY LAARRAGIAE PGRWRTGLTL VPRGEFSIVI AGLAVAAGSV DPQLAALATA YVLITVIVGP TLARVPDLDW FKGWLRQRAA KQQAHPMPVG D
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