| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0115 |
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| Symbol | |
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| ID | 5056548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 124781 |
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| End bp | 125953 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472382 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001156978 |
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| Protein GI | 145592681 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.555212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCCA AGGACTGGAT CGAGAAGGAC TTCTACGCCG CCCTTGGCGT GGGCAAGGCC
GCCTCTGCTG ATGAGATCAA GAAGGCGTAT CGGCAGCTGG CGCGCGAGTC GCACCCGGAT
CGCAACCCTG GCGACGCAAA GGCCGAGGAG CGGTTCAAGG CGGCCTCCGA GGCGTACACG
GTGCTCGGCG ATGACGCGAA GCGCCGGGAG TACGACGAGA TGCGTTCGTT GTTCGGCTCG
GGCGCGTTCC GGCGCAACGC CCGCGGAGCG GGCCAGTCCG GCGGGGCGCC GTTCGACGTC
GGCGACCTGT TCGGTGGCGC GGCCGGTGGT GATCGGCGGT TCAGTGGAGC AGGGTTTCAG
GACCTGTTCG GTTCGATCTT TCCGGGTGGG GGTGGGACCG CATCGCGTGG CCCGGCTCGG
GGACGGGACG TGGAGACCGA GGTCGCGCTC GACTTCGGCG ACGCGATTCG CGGGGTGACC
CTGCCGCTGA CGTTGCGGAC GCCGGGGGTG TGTGACACCT GTCACGGCGA CGGGGCGAAG
CCCGGCACGC AGCCGCGTGC CTGTCCGACC TGTCGCGGTG CCGGCGTGAC CACCCGTAAC
CAGGGGTCGT TCAGCTTCTC CGAGCCCTGC TCCGACTGCC AGGGCGTTGG CACTGTGGTG
GACGAGAAGT GCCCGGAGTG TCAGGGCACC GGTGGCGTCA CCAAGAACCG TACGTTGAAC
GTCCGGTTCC CCGCCGGGGT GGCCGACGGT CAGCGGATCC GGCTGGCCGG TCGGGGTGAG
CCCGGGGCGC GGGGCGGGCC CGCCGGTGAC CTGTTCATTC AGGTCAAGGT CAGTCCGGAC
GACCTGTTCG GGCGAGCCGG AGACGACCTG ACGCTGACGG TGCCGATCAC CTTCGCTGAG
GCGGTACTCG GCACCGATCT GCGGGTACCC ACCTTCGACG GCGCGGTAAC CCTCCGGGTG
CCGCCGGGTA CGCCGAGCGG ACGTGTCCTC CGGGCCCGGG GCAAGGGAGT GGTCCGTACC
GCCGGGCGGG CCGGTGATCT GCTGGTCACC CTTGAGGTGA CGGTCCCGGC GAAGCTGTCG
GAGGAGGCGC GGGCGGCGTT GGAGACGTTT GTCGCCCAGA CCCCGCCGGC TGCTCGGGAA
CATCTCGACG CGCGGGTGCG TCGGGGGAGC TGA
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| Protein sequence | MSSKDWIEKD FYAALGVGKA ASADEIKKAY RQLARESHPD RNPGDAKAEE RFKAASEAYT
VLGDDAKRRE YDEMRSLFGS GAFRRNARGA GQSGGAPFDV GDLFGGAAGG DRRFSGAGFQ
DLFGSIFPGG GGTASRGPAR GRDVETEVAL DFGDAIRGVT LPLTLRTPGV CDTCHGDGAK
PGTQPRACPT CRGAGVTTRN QGSFSFSEPC SDCQGVGTVV DEKCPECQGT GGVTKNRTLN
VRFPAGVADG QRIRLAGRGE PGARGGPAGD LFIQVKVSPD DLFGRAGDDL TLTVPITFAE
AVLGTDLRVP TFDGAVTLRV PPGTPSGRVL RARGKGVVRT AGRAGDLLVT LEVTVPAKLS
EEARAALETF VAQTPPAARE HLDARVRRGS
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