Gene Strop_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0114 
Symbol 
ID5056547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp123902 
End bp124699 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID640472381 
ProductGrpE protein 
Protein accessionYP_001156977 
Protein GI145592680 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.750568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA AGCCACGAGC CACCGACCCG GACGCCACCG GGTCGGTGCC GGGTGGCTCC 
GCCTCCGCCG GCGAGGCCGG TGCGGAGCCG CGGGTTGTGA TCCGTGACAA CCGCAAGATC
AGCAATGCTG CCGGCGCCAG CTCGGATGCT GCTGGCACGG GCTCGGACTC CGGCTCGGAC
GCGGCGGACG CGGACGCGGC CGCCGCCGAC GCCGGGTCGG ATGTCCCGGC AGCAGGGCTG
GTCGAGGAGG CGGATGTCGT GGTTGACGAG ATCCAGGCCG AGACCACCGA GGGGTCACCC
GTCAGCCCGC CGGTGGTGGA CGCGCCGGCC GAGCCGGTTG ACGCCGCCAC AGCGACCTCA
CTCGGGGCAG AGCTGGAGGC GTTGCGGGCC GATCTGGATG AGCGGACTCG GGACCTCCAG
CGGGTGACCG CGGAGTACGC CAACTACCGC AAGCGGGTCG ATCGAGACCG GGCGCTCGTC
ACCGAGCAGG CCACCGGCTC GGTGCTCGCC GCGTTGCTGC CGATCCTCGA CGACCTCGAC
CGGGCCCGTG AGCACGGTGA CCTGGTGGGA CCGTTCGGAT CGGTGGCGGA GCAGCTCACC
ACCGCGCTCG GCAAGTTCGG GCTGACCCCG TTCGGTGCCG AAGGCGACCC GTTTGACCCG
ACCCAGCACG AGGCGGTGAC GCACCAGACC TCGGCCGAGG TCACCGAGCC GACCTGCGTA
CAGGTCATGC GGCGGGGCTA CCTGGTAGGG GAGCGGCTGC TGCGGCCGGC GCTGGTCGGG
GTCGCCGAAC CGGAGTGA
 
Protein sequence
MTDKPRATDP DATGSVPGGS ASAGEAGAEP RVVIRDNRKI SNAAGASSDA AGTGSDSGSD 
AADADAAAAD AGSDVPAAGL VEEADVVVDE IQAETTEGSP VSPPVVDAPA EPVDAATATS
LGAELEALRA DLDERTRDLQ RVTAEYANYR KRVDRDRALV TEQATGSVLA ALLPILDDLD
RAREHGDLVG PFGSVAEQLT TALGKFGLTP FGAEGDPFDP TQHEAVTHQT SAEVTEPTCV
QVMRRGYLVG ERLLRPALVG VAEPE