Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0114 |
Symbol | |
ID | 5056547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 123902 |
End bp | 124699 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472381 |
Product | GrpE protein |
Protein accession | YP_001156977 |
Protein GI | 145592680 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.750568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGACA AGCCACGAGC CACCGACCCG GACGCCACCG GGTCGGTGCC GGGTGGCTCC GCCTCCGCCG GCGAGGCCGG TGCGGAGCCG CGGGTTGTGA TCCGTGACAA CCGCAAGATC AGCAATGCTG CCGGCGCCAG CTCGGATGCT GCTGGCACGG GCTCGGACTC CGGCTCGGAC GCGGCGGACG CGGACGCGGC CGCCGCCGAC GCCGGGTCGG ATGTCCCGGC AGCAGGGCTG GTCGAGGAGG CGGATGTCGT GGTTGACGAG ATCCAGGCCG AGACCACCGA GGGGTCACCC GTCAGCCCGC CGGTGGTGGA CGCGCCGGCC GAGCCGGTTG ACGCCGCCAC AGCGACCTCA CTCGGGGCAG AGCTGGAGGC GTTGCGGGCC GATCTGGATG AGCGGACTCG GGACCTCCAG CGGGTGACCG CGGAGTACGC CAACTACCGC AAGCGGGTCG ATCGAGACCG GGCGCTCGTC ACCGAGCAGG CCACCGGCTC GGTGCTCGCC GCGTTGCTGC CGATCCTCGA CGACCTCGAC CGGGCCCGTG AGCACGGTGA CCTGGTGGGA CCGTTCGGAT CGGTGGCGGA GCAGCTCACC ACCGCGCTCG GCAAGTTCGG GCTGACCCCG TTCGGTGCCG AAGGCGACCC GTTTGACCCG ACCCAGCACG AGGCGGTGAC GCACCAGACC TCGGCCGAGG TCACCGAGCC GACCTGCGTA CAGGTCATGC GGCGGGGCTA CCTGGTAGGG GAGCGGCTGC TGCGGCCGGC GCTGGTCGGG GTCGCCGAAC CGGAGTGA
|
Protein sequence | MTDKPRATDP DATGSVPGGS ASAGEAGAEP RVVIRDNRKI SNAAGASSDA AGTGSDSGSD AADADAAAAD AGSDVPAAGL VEEADVVVDE IQAETTEGSP VSPPVVDAPA EPVDAATATS LGAELEALRA DLDERTRDLQ RVTAEYANYR KRVDRDRALV TEQATGSVLA ALLPILDDLD RAREHGDLVG PFGSVAEQLT TALGKFGLTP FGAEGDPFDP TQHEAVTHQT SAEVTEPTCV QVMRRGYLVG ERLLRPALVG VAEPE
|
| |