Gene Strop_0113 details

Gene Information

• Locus tag: Strop_0113
• Symbol: dnaK
• ID: 5056546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 122017
• End bp: 123858
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640472380
• Product: molecular chaperone DnaK
• Protein accession: YP_001156976
• Protein GI: 145592679
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACGTG CGGTCGGTAT CGACCTCGGC ACGACGAACT CCTGCGTCAG CGTCCTGGAG 
GGCGGTGAGC CCACCGTGAT CGCCAACGCC GAGGGCTCGC GGACGACCCC GTCGATCGTC 
GCGTTCGCCC GAAACGGCGA GGTGCTTGTC GGTGAGGTCG CCAAGCGGCA GGCGGTGACC 
AACCCGGACC GGACGATTCG GTCGGTCAAG CGGGAGATCG GCACCGACTG GTTCGTCGAC 
ATCGACGACA AGAAGTACAC GCCACAGGAG ATCTCGGCCC GTACGTTGAT GAAGCTCAAG 
CGGGACGCCG AGGCGTACCT GGGTGAGCAG ATCACCGATG CGGTGATCAC CGTTCCGGCG 
TACTTCAACG ACGGCCAGCG GCAGGCCACC AAGGAGGCCG GTGAGATCGC CGGCTTCAAC 
GTGCTGCGGA TCGTCAACGA GCCGACCGCG GCCGCCCTGG CGTACGGGCT GGACAAGGGC 
TCCAAGGAGC AGACCGTCCT GGTCTTCGAC CTCGGCGGCG GCACCTTCGA CGTGTCGCTG 
CTGGAACTGG CCGAGGGCGT CATCGAGGTC AAGTCGACCA GCGGCGACAA CCTCCTCGGC 
GGGGACGACT GGGACCAGCG GATTATCGAC CACCTGGTCA AGACCTTCAA CGGTGAGCAC 
GGCATCGACC TGGCCCAGGA CAAGATGGCG ATGCAGCGCC TCAAGGAGGC GGCGGAGAAG 
GCCAAGATCG AGCTGTCCGC CGCTGCCACC AGCAACATCA ACCTGCCGTA CATCACCGCT 
GGTGCCGCCG GTCCGCTGCA CCTTGACGTG ACGATCACCC GCGCCGAGTT CCAGCGGATG 
ACGCAGGACC TGCTGGACCG TTGCAAGGGC CCGTTCGAGC AGGCCGTCAA GGACGCCGGG 
ATCAAGGTCG GCGATGTCGA ACACGTCATC CTGGTCGGCG GTTCGACCCG GATGCCGGCC 
GTGACCGAGC TGGTCAAGCA GCTCACCGGC CGGGACCCGA ACAAGGGCGT GAACCCGGAC 
GAGGTCGTCG CCGTCGGCGC CGCCCTGCAG GCCGGTGTGC TCAAGGGCGA GGTCAAGGAT 
GTCCTGCTGC TCGACGTGAC CCCGCTGAGT CTCGGAATCG AGACCAAGGG GGGCATCTTC 
ACCAAGCTGA TCGAGCGCAA CACCACCATT CCGACCAAGC GCTCCGAGGT CTTCACCACG 
GCTGACGACA ACCAGCCGTC CGTGTTGATC CAGGTCTTCC AGGGTGAGCG GGAGATCGCC 
GCCTACAACA AGAAGCTCGG CACCTTCGAG CTGACCGGCC TGCCGCCGGC GCCGCGCGGC 
ATGCCGCAGA TCGAGGTCAC CTTCGACATC GACGCCAACG GCATCGTGAA CGTCCACGCG 
AAGGACACCG GCACCGGCAA GGAACAGAAG ATGACGGTCA CCGCCGGCTC CTCGCTGCCG 
AAGGAGGACA TCGAGCGGAT GCGTCGGGAC GCCGAGGAGC ACGCCGAGGA GGACAAGCAG 
CGGCGTGAGG AGGCGGAGAC CCGCAACGTG GCCGAGGCGC TGCAGTGGCA GACCGAGAAG 
TTCCTCGCCG AGAGCGGCGA CAAGCTGCCC ACCGAGTCCC GGGACCAGAT CAACGAGGCG 
CTCGGCGAGC TGCGCAGTGC CCTCGGCGGT CAGGACATCG AGAAGATCAA GTCTGCGCAC 
GCGCAGCTGG CCCAGGTTTC CCAGCAGGCC GGCTCCCAGC TCTACACCCA GCAGCAGGGT 
GAGCAGGCCG GTGCGACCGG CGACCAGGCT GGCGCTCAGG CCGGTGGCCC GGACGACGTG 
GTCGACGCGG AGATTGTGGA TGAGGACAAG GGCAAGAAGT GA 

 

Protein sequence

MARAVGIDLG TTNSCVSVLE GGEPTVIANA EGSRTTPSIV AFARNGEVLV GEVAKRQAVT 
NPDRTIRSVK REIGTDWFVD IDDKKYTPQE ISARTLMKLK RDAEAYLGEQ ITDAVITVPA 
YFNDGQRQAT KEAGEIAGFN VLRIVNEPTA AALAYGLDKG SKEQTVLVFD LGGGTFDVSL 
LELAEGVIEV KSTSGDNLLG GDDWDQRIID HLVKTFNGEH GIDLAQDKMA MQRLKEAAEK 
AKIELSAAAT SNINLPYITA GAAGPLHLDV TITRAEFQRM TQDLLDRCKG PFEQAVKDAG 
IKVGDVEHVI LVGGSTRMPA VTELVKQLTG RDPNKGVNPD EVVAVGAALQ AGVLKGEVKD 
VLLLDVTPLS LGIETKGGIF TKLIERNTTI PTKRSEVFTT ADDNQPSVLI QVFQGEREIA 
AYNKKLGTFE LTGLPPAPRG MPQIEVTFDI DANGIVNVHA KDTGTGKEQK MTVTAGSSLP 
KEDIERMRRD AEEHAEEDKQ RREEAETRNV AEALQWQTEK FLAESGDKLP TESRDQINEA 
LGELRSALGG QDIEKIKSAH AQLAQVSQQA GSQLYTQQQG EQAGATGDQA GAQAGGPDDV 
VDAEIVDEDK GKK