Gene Strop_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0111 
Symbol 
ID5056544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp119985 
End bp120362 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID640472378 
Producthypothetical protein 
Protein accessionYP_001156974 
Protein GI145592677 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.482579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTTTG TCGATGCCAT TCGTTCGGTG CTTACCCAGT ATGCTGGCTT CAGTGGGCGG 
GCTCGTCGCT CTGAATACTG GTGGTTCTAC CTCTTCATAA CCATCGTCAA TATCGTGTTC
GGGTGCCTTA GCGGTGTGGC GGAAGCCGCC GTCTTCATTG GCCTGATCGT GTCCCTGGCA
CTTCTCCTGC CGACTATCGC GGTCAGCGTG CGACGTCTGC ACGACACCAA CCGTTCCGGC
TGGTTCATGC TGCTCGGGCT GATCCCGATT GTCGGCGGGA TTATCCTGTT GATCTTCTTC
ACGCAGGACA GCAAGCCCGG CCCGAACCGC TTCGGCCCCA ACCCGAAGGA CCCGGCCGCC
TCCGGTCTGG TCGCCTGA
 
Protein sequence
MLFVDAIRSV LTQYAGFSGR ARRSEYWWFY LFITIVNIVF GCLSGVAEAA VFIGLIVSLA 
LLLPTIAVSV RRLHDTNRSG WFMLLGLIPI VGGIILLIFF TQDSKPGPNR FGPNPKDPAA
SGLVA