| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0107 |
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| Symbol | |
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| ID | 5056540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 115228 |
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| End bp | 116691 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640472374 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_001156970 |
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| Protein GI | 145592673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.399626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAG TCAAGGAATT CAACCTGCCC GACCTGGGCG AGGGCCTGAC CGAGGGGGAG
ATCCTCAGCT GGCTCGTCAA GGTGGGCGAC ACCATCGAGC TGAACCAGCC CATCGTCGAG
GTGGAGACCG CCAAGGCAGC GGTCGAGATC CCGGCGAAGT GGGCCGGCCG GGTGCAGTCG
ATCTTCCATG CGGAGGGCGC GACCGTCGAG GTCGGAACGC CGATCATCGC GATCGACACC
GACCCGACCG CCGGCCCGCT GGCGACACCG GAGCCGACCG GCGGCACCGC GAAGGCCTCG
TCGGCCGCCG CGTCCGCGGC GGTGGAGGCC CCCAGGGGCT CGACCGAGTC CGGCCAGAAC
GGCGATGCCA CGTCCGGTGG GCGCACTCCG GTGCTGGTGG GCTACGGCCC GCGTACCACC
GCCGCGAAGC GCCGCCCCCG GAAGGGGACC GCGCCGGCCG CTCCAGCCGC TCCAGCCCGG
CCGACCCCCG TACCGGCCCA GCCGACCCCC GTACCGGTGG CCACCGGGCC TACCCCCGGT
AGCGGGCGCA GTGGTCCGGC CGGCGGTACT CCGGTGCTGG CCAAGCCTCC GGTACGCAAA
CTCGCGAAGG ATCTCGGGGT CGATCTGTCC ACTGTGACCG GATCCGGTCC GCTCGGCTCG
ATCAGCCGGG AGGACGTACG GCAGGCGGCG AGCGCCACCC CGACGACGGC TGAACCGTTG
GCGGCGGCCG TGCCGGTCGG TAGCACGACG GCGAACGTCG GTGCACATCG CGAGCAGCGG
ATCCCGGTCA AGGGAGTCCG GAAGCTGACC GCGGAGAACA TGTCCCGCTC GGCGTTCACC
GCGCCACACG TGACGGAGTT CCTGACCGTC GACATGACCC GGGCGATGAA GGCCCTGGAC
CGGCTCCGCC AGCGGCGGGA GTGGCGGGAT GTCCGGGTCT CCCCGCTGCT GCTGGTCGCC
AAGGCCGTGT TGTTGGCGGT CCGGCGCCAC CCCATGGTGA ACTCGACCTG GGCGGGCGAT
GAGATCGTCG TCAAGGACTA CGTCAATCTC GGCATCGCGG CGGCGACCGA GCGCGGCCTG
ATCGTGCCGA ACGTGAAGGA CGCGGGGCGG CTCACCCTGC GGGAGCTGGC GGACTCGCTG
ACCGATCTCG TTCAGACCGC CAAGGCCGGG AAGACCTCAC CGGGAGATAT GTCCGGCGGC
ACGTTGACCA TCACCAACGT TGGGGTCTTC GGTGTGGATA CCGGTACGCC GATTCTGCCG
CCGGGTGAGT CGGCGATCCT GGCCTTCGGC GCGGTCCGCA AGATGCCGTG GGTACATAAG
GGCAAGGTCC GCCCTCGCCA GGTCACCACA CTTGGCCTCT CGTTCGACCA TCGGATCATC
GACGGGGAGC TCGGCTCGCG GTTCCTGCGG GACATCGGCG ACTTCCTCGC CGATCCGGAG
GCGGCGCTGC TCGCCTGGAC CTGA
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| Protein sequence | MSRVKEFNLP DLGEGLTEGE ILSWLVKVGD TIELNQPIVE VETAKAAVEI PAKWAGRVQS
IFHAEGATVE VGTPIIAIDT DPTAGPLATP EPTGGTAKAS SAAASAAVEA PRGSTESGQN
GDATSGGRTP VLVGYGPRTT AAKRRPRKGT APAAPAAPAR PTPVPAQPTP VPVATGPTPG
SGRSGPAGGT PVLAKPPVRK LAKDLGVDLS TVTGSGPLGS ISREDVRQAA SATPTTAEPL
AAAVPVGSTT ANVGAHREQR IPVKGVRKLT AENMSRSAFT APHVTEFLTV DMTRAMKALD
RLRQRREWRD VRVSPLLLVA KAVLLAVRRH PMVNSTWAGD EIVVKDYVNL GIAAATERGL
IVPNVKDAGR LTLRELADSL TDLVQTAKAG KTSPGDMSGG TLTITNVGVF GVDTGTPILP
PGESAILAFG AVRKMPWVHK GKVRPRQVTT LGLSFDHRII DGELGSRFLR DIGDFLADPE
AALLAWT
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