| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0083 |
|---|
| Symbol | |
|---|
| ID | 5056516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 91285 |
|---|
| End bp | 92154 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640472350 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001156946 |
|---|
| Protein GI | 145592649 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTCA CGGCTCCTGA CCGCACCGGT GAAGTCCAGT TGTCTGACGG GCGGTTGCTG
GGTTGGGCAG AATGGGGACC GCCGGAGGGG ACACCCGTAC TGTTCTCCCC TGGTGCCGCC
ACCAGCCGCT GGCTCGGGTT CGGCGCCGAC GTTATCGACC GCCTCGGCGT GCGCCTCGTT
TCTGTGGAAC GTCCGGGGCT CGGCGCATCG ACGCCGCTGC CCGGTCGAAC GTTCGCCGAC
TTCGTCGCCG ACATCCGGCA GTTCACCACG ATACGCGGAT TGGGTCGGCC CGCGATGGTC
GGAAACTCGC AGGGCGCACC GTTCGCGCTG GCCTGCGCGG AGGAAGATGT CACCGCTGCC
CTCGCCATCG TTTCCGGGGC AGACGAGGTG GCCGCGCCGG AGTTCGCCTC CGTACTGCCA
GCCGAGCTAC GCAAGCTCGT CGACTGGACG GTACGTGACG CGGCAGAGGC AGAGCGCTTC
TTCGCCGGAT ACAGCGCCGA CTCACTGCTC GACTTCGTAC TGGGCGGCAG CCCAGAGTGC
GACCTCGAGG TATACCGCGA GCCCGGGTTC GCGGACGCCT ATCGTCGTGC CCTGAACGAG
GCGTTCGCGC AGGGGGCAGC TGGGTACGCG CGGGACACGG TGCTGGCAAT GAGCCCCTGG
TCCATCGACC TCAATAAGAT CTTCGTGCCA GTCGACGTCT GGTACGGCGA ATTGGACCAG
AGCCATTCGC CAGACAACGG ATCGCTGCTC GCCACCCGGA TACCCGGCGC ACAGCATCAC
CTCGTACCCG CGATCGGCGG AGCGGTGCTG TGGACACATG CCGAGCCGAT CCTCAGCACC
CTCTTGACCA GGGCGAACAT CCAGTCGTAG
|
|---|
| Protein sequence | MYVTAPDRTG EVQLSDGRLL GWAEWGPPEG TPVLFSPGAA TSRWLGFGAD VIDRLGVRLV
SVERPGLGAS TPLPGRTFAD FVADIRQFTT IRGLGRPAMV GNSQGAPFAL ACAEEDVTAA
LAIVSGADEV AAPEFASVLP AELRKLVDWT VRDAAEAERF FAGYSADSLL DFVLGGSPEC
DLEVYREPGF ADAYRRALNE AFAQGAAGYA RDTVLAMSPW SIDLNKIFVP VDVWYGELDQ
SHSPDNGSLL ATRIPGAQHH LVPAIGGAVL WTHAEPILST LLTRANIQS
|
|---|
| |