| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0081 |
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| Symbol | |
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| ID | 5056514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 88254 |
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| End bp | 89795 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640472348 |
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| Product | amidohydrolase |
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| Protein accession | YP_001156944 |
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| Protein GI | 145592647 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.601015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGA CGCGACGGAG CCTCACCCAG TTCATGGCTG CCGGGATCGG GGGTGGATTG
CTCACCGCTG GACCAGGAGT CCGAGCCGGC CACGACCTCG GTGACCGTCA CCCGGACCGC
AACGGAGCCG GGTTCCGGGG ACCTCGGATG TACCGCGGCT GGATTCTGTA TGTGGTCGAC
ACACCACCCT CGGGAGCTGA TGATACCGAG GCCGACCAAC AACGGTGGCT GCGCCAATAC
CGCGACGGGG TTCTTGTCGT GTCGACCGAC GGGCACATAG CCGATGTCGG CAACTACCAT
GAGGTGGCTC CTCGTTACCC GGACATACCC TGCCGAGACT ATCGAGGCAT GCTGATCATG
CCAGGCTTCA TTGATTCTCA CGTGCACTAC GTACAGACCC AGATCATCGC GTCGTATGGC
CGGACGCTGC TCGAGTGGCT GAACGAATTC GCCTTTCCGG TCGAGGAGCA GTTCTCCGCT
CCGCAGGCCG CCGCGGCAGT AGCCGACATC TTCCTGAGAT ACCTCTTTCA GAACGGCACC
ACCACGTCGG TCACCTTCGC CGCAACCTAC CCGGTATCGG CAAGCGCTTT ATTTGAGGCG
GCGTCCGCAT ACGACATGCG CATTATCACC GGCAAGACGT GGATGGACCG CAACGCTCCG
CCACAGCTGC TGGACACGCC GGAGTCGGCC TACCGCGACA GCCGAGAACT GATCAGAAGA
TGGCACGGCA AGGGACGTAA CCTTTATGCC ATCACCCCAC GCTTCGCCAT TACCAGCACC
TTCGAGCAAC TCCGTCTGGC CGGCATCCTT CACGCTGAGT ATCCCAGTAC CTACATCCAC
ACCCATTTGT CGGAGACGAG AGCCGAGCTG GCCCTGGTCC GTGAGCTGTT CCCCGGGTTC
CGGGACTACC TCGCCGTGTA TGAGGCGGCC GGCCTGGTGA CCGAGCGATC CGTGCTTGCG
CACGGTGTCT ACCTGTCCGG CTCCGAACTG TCTCGCGTCA GCGCCGCCCG TTCGACCATC
GCGCACTGTC CGACCTCGAA CCTGTTCCTG GCCAGTGGTC TGTACGACCT GCAGCGGGCG
AACCGCCGCG GTGTGCAGAC GTCTATAGGC ACCGACGTCG GCGGGGGAAC GTCATTCTCC
TTGCTACGGA CGCTCGATGA GACGTACAAG TCGCAGCATT TGCAAGGGTA TCCCGTGAAT
GCCTTCGAAA TGCTCTACCT GTGCACTCTC GGGGCAGCCC GGCACCTACA CCTGGCGGGA
AAGGTCGGCA GCTTGGATAT AGGGCACGAA GCGGACTTCG TTGTGATCGA CTATCTGGCG
CAGGGTATTC AGCGCACCCG AATGGAGTAT CTGCGCAGTA CCGGCGGCTG GACCACCGAG
TCGATGCTGT TCGGCCTGGA GATAACCGGC GATGACCGGA ACGTCGCTGC AACCTATGTC
ATGGGTCGTC CCGTGTACGC CTCGAGGCTC CACCGAGGGA GTCACGTCCT GCCTCCGAGC
AGGGCGAGTG GGGTGTTGCC CGAAGGCCTC GTGGACACCT GA
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| Protein sequence | MPLTRRSLTQ FMAAGIGGGL LTAGPGVRAG HDLGDRHPDR NGAGFRGPRM YRGWILYVVD
TPPSGADDTE ADQQRWLRQY RDGVLVVSTD GHIADVGNYH EVAPRYPDIP CRDYRGMLIM
PGFIDSHVHY VQTQIIASYG RTLLEWLNEF AFPVEEQFSA PQAAAAVADI FLRYLFQNGT
TTSVTFAATY PVSASALFEA ASAYDMRIIT GKTWMDRNAP PQLLDTPESA YRDSRELIRR
WHGKGRNLYA ITPRFAITST FEQLRLAGIL HAEYPSTYIH THLSETRAEL ALVRELFPGF
RDYLAVYEAA GLVTERSVLA HGVYLSGSEL SRVSAARSTI AHCPTSNLFL ASGLYDLQRA
NRRGVQTSIG TDVGGGTSFS LLRTLDETYK SQHLQGYPVN AFEMLYLCTL GAARHLHLAG
KVGSLDIGHE ADFVVIDYLA QGIQRTRMEY LRSTGGWTTE SMLFGLEITG DDRNVAATYV
MGRPVYASRL HRGSHVLPPS RASGVLPEGL VDT
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