Gene Strop_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0076 
Symbol 
ID5056509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp83609 
End bp84655 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID640472343 
Producthypothetical protein 
Protein accessionYP_001156939 
Protein GI145592642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.395219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCG ATCTCGATCA GCGGCTTGCC ACGATGCTTC AGCACCAAGC GGGCGGCGAC 
GTCGACCCGA CGCCGATCGT GAGACACGCC CGCCACCGCG GTCGCCGGCT ACGACTACGC
CGCCGGGGGC TGGTCGCCGC AGGAGCGGCA GCAGCGTGCG CCGCGCTCGC CGTCGTGGTC
ATGGTGGCCC CGCTCGGTAG GACGCCGGTT GCTGCGCCGG TGACTCCGAT AGCTCTGGTC
CTGCCGGACG CACCCGGTCA GCCCGGCGCT GTTGCGCGTC CCGACCTGGT CGGTACCGAC
CCCGGTGTGA TGCATTTCGT GACCGACGCC CTGGTTCACG GCGCCGTGTC CGCCACGTGG
ACCGCGGGAC GCGGCGTCGA GAGTGTCGAG CTGCGGGGCC CGAATGGTCA GGCCCGGCTC
ATGCTGGCCC GCAGCACCGA GATGCTGGAC GAGCAGCAGC AAACGCTGGG GTCGGAGGGA
CGGCCGCGGC AACACAGTGA CGTGCGCGTC GAAGGCCACC CCGGGGTCGC CTGGTTTGAT
GCGGCCGGTG ACCGGCAGCT GTGGTTCGTT CGGTGGCAAC CAGCTGACGG GCTCTGGGCC
CAGCTCGACA TCTATGCTGC CGGTCGTGAC GAGGCGACAG CCGCGGCGGG TCGCGTCCGG
TTCGACGGCG CTCAGCGCTG CGTCGTGCCG TTCCGCCTAC AGACGCTGCC GTCCGGCGGA
CGGCTGCTCG CATGCTCGGT CACGCTCGGC CGGTCAGAGC ATGGTGTCTT CACAAGCGGT
TCACTCGTCG TAGGAGACGG ATCCGGCCGC TGGCTGACCG TCCGAGCTCA GCTCGCGCCG
GATTACGAGG CCAAAGCCGG CGACCTCGTC GCAGGGCCCT ATCGAGCCCG TCGGCAGGGC
GGCGACGTCT TGGAGATGGG AGTCGGGCCG TGCGTCGTCG AAGCATTCCT CGAGGGCTGG
GGACGCGGCT ACACCGAGTC GGATGGCTTG ACGGTTCTCG GCGGGTACCA GCCAGCCCAC
GACCTCGGTC GTCCGGCCAT GTGGTGA
 
Protein sequence
MSGDLDQRLA TMLQHQAGGD VDPTPIVRHA RHRGRRLRLR RRGLVAAGAA AACAALAVVV 
MVAPLGRTPV AAPVTPIALV LPDAPGQPGA VARPDLVGTD PGVMHFVTDA LVHGAVSATW
TAGRGVESVE LRGPNGQARL MLARSTEMLD EQQQTLGSEG RPRQHSDVRV EGHPGVAWFD
AAGDRQLWFV RWQPADGLWA QLDIYAAGRD EATAAAGRVR FDGAQRCVVP FRLQTLPSGG
RLLACSVTLG RSEHGVFTSG SLVVGDGSGR WLTVRAQLAP DYEAKAGDLV AGPYRARRQG
GDVLEMGVGP CVVEAFLEGW GRGYTESDGL TVLGGYQPAH DLGRPAMW