Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0073 |
Symbol | |
ID | 5056506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 81244 |
End bp | 81948 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640472340 |
Product | HAD family hydrolase |
Protein accession | YP_001156936 |
Protein GI | 145592639 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.772732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ACCTCGGTCG ACTGCTTGGC GAAGTCGGCG CGGTGCTACT CGACTTCGAC GGACCGGTGT GCAGCATCTT CGCTGGATAT CCCGCGCCGC AGGTCGCAGC CGAGTTGGTC AACGTGCTGC GGCGGCGCGG GGTTGATGTG CCTCCGGATC TCGCCAGCGA GCCGGACCCG CTCGAAGTGC TACGCCGCAC GGGCGCGGCC GGCGACCACG GTGTCACGCG GACGGTAGAG GACGTGCTCT GCGAGGCCGA GCGCCGAGCC GTCGAGACTG CGGCGCCGAC GCCGTACGGC CGGGAGGTCA TCGTGGCGGC TCGACAGGCC GGGATGCCGG TGGCGGCCGT GAGTAACAAC TCGGCCGGCG CGGTGACGGC CTACCTCACG GCGCATCGGC TCGCCGAGCA CGTCTCGCCG GTGGTCGGCC GGGCGTACGC CGAGCCGGGC CGCATGAAGC CCAACCCGGA ACCGATCCTG CAAGCCGTGC GCTCCCTCGG CGAGCTAGCG GCCCGATGCG TGCTGATCGG TGACTCGCTC TCCGACATCG AGGGAGCGCG GGCCGCTGGG GTCGCGGTGA TCGGCTACGC GAATCGGCCG ACGAAGGTCG GCGACTTCCG GCTCGCCAGG GCGGACGCAG TGGTCACCAG CATGGGCGAG ATCGCCGCGG CGCTGATCGA CCGGGGGAGC AACAGCGCGA GTTGA
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Protein sequence | MSADLGRLLG EVGAVLLDFD GPVCSIFAGY PAPQVAAELV NVLRRRGVDV PPDLASEPDP LEVLRRTGAA GDHGVTRTVE DVLCEAERRA VETAAPTPYG REVIVAARQA GMPVAAVSNN SAGAVTAYLT AHRLAEHVSP VVGRAYAEPG RMKPNPEPIL QAVRSLGELA ARCVLIGDSL SDIEGARAAG VAVIGYANRP TKVGDFRLAR ADAVVTSMGE IAAALIDRGS NSAS
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