| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0058 |
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| Symbol | |
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| ID | 5056491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 67688 |
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| End bp | 68875 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472325 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001156921 |
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| Protein GI | 145592624 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.251229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA AGGACGGACA CCGCCGCTAC GGCAGCGTGC GCAAGTTGCC CTCCGGCCGC
TACCAAGTTC GACACCTCGC GCCGGACGGC ACGATGCGAC CCGGGGATCA GACATTCGCC
CGCAAAACCG AGGCCGAGCG GTATCTAACC CTGATTGAGG CGCAGATGGC CCGCAGGGAG
TGGATCGACC CTAATCGAGG AAAGATCCGG TTGCAGGACT ATGCGGAACG GTGGATCACG
GAACGGCCGA ACCTGCGCCC CCGCACTGTC CATCTGTACC GATGGACGCT GGGCAAGCAC
ATTACGCCGC ACCTGGGCGG CGTGCCGCTC AACCGGATCG ACACACCGAT GGTCCGGGAG
TGGCGCTCCC GTCTGCTCGC CGACGGCGTG TCGCTGACCA TGGCCGCGAA GGCGTACCGA
CTGCTGCGCG CCATCCTGAT GACAGCCGTG AAGGAGGACG AACTGATCAG GATCAACCCG
TGCCGCGTTG TCGGTGCCGA CCAGGAGAAT GCCGCCGAGC GGCCGGTGCT CACCGTTCCG
CAAATCTTTG CCTTGGCCGA GCGGATGCCA GACCGTTTTC GGGCGCTGAT CCTGGTAACC
ACGTTCGGAT GCCTGCGATG GGGTGAAGCG GTCGCCCTGC AGCGGCAAGA CGTCGACCTG
GTCGCCGGCA CGGTACGAGT ACGGCAAGCA TTCGTCGAAC ACCGAGGAAC CGGCCTGATC
CTCGGCCCGC CGAAGTCCCG GGCCGGTGTG CGAACCATCG CGCTACCAAA GGCGGCACTG
CCCATGCTGA AACAGCACGT GAGCAGCCAC GTCGGCGAGG CACCGGAAGC ATTTGTGTTT
ACCGGTGAGA ACGGCCGGAA TCTCTGGCGC GGCAACTTCA ACAAGCTGGT CAAGTGGCCC
GAGGCGGTCG CCGCCGTGGG CGTGCCCGGC CTGCACTTTC ACGACCTGCG GCACACCGGC
AACACGCTCG CGTCGCGAGC GCCGGGCGCG AGCCTGCGCG ACATCATGGC GCGGATGGGG
CACGACAGCC CTCGCGCCGC GCTGATCTAC CAGCACGCCA ACCGGGAGGC CGACCAGGGC
ATCGCCGACG CGATCGACAA GGCGGTCAAG GCGGCCCGGC GCAAGCCGAG CAAGCGCCGG
GTCAAGCGGG CTACCGAGGG CGGCGGACCG GCCACCGAGG CACGCTAA
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| Protein sequence | MPNKDGHRRY GSVRKLPSGR YQVRHLAPDG TMRPGDQTFA RKTEAERYLT LIEAQMARRE
WIDPNRGKIR LQDYAERWIT ERPNLRPRTV HLYRWTLGKH ITPHLGGVPL NRIDTPMVRE
WRSRLLADGV SLTMAAKAYR LLRAILMTAV KEDELIRINP CRVVGADQEN AAERPVLTVP
QIFALAERMP DRFRALILVT TFGCLRWGEA VALQRQDVDL VAGTVRVRQA FVEHRGTGLI
LGPPKSRAGV RTIALPKAAL PMLKQHVSSH VGEAPEAFVF TGENGRNLWR GNFNKLVKWP
EAVAAVGVPG LHFHDLRHTG NTLASRAPGA SLRDIMARMG HDSPRAALIY QHANREADQG
IADAIDKAVK AARRKPSKRR VKRATEGGGP ATEAR
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