| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0051 |
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| Symbol | |
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| ID | 5056483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 59160 |
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| End bp | 60725 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472317 |
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| Product | sortase family protein |
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| Protein accession | YP_001156914 |
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| Protein GI | 145592617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.447645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGG CATCGGAGAG CTGGCAACCT GATCGGGACG ACGACCAGAC GGCGTTCCTG
CCGCGGCTGG AGCGTCCCTG GCAGCAGCCC CGGCACGAGT CGGAGCAGCC GTCGTCCCCG
CCCGGACCCG CGCCCCAACC GCCGAGCCAG CCGGGCGCAC TGCCCCAGTC GGGCGCGCCG
AGCCAACCGG GCGCCCTGCC CCAGCCGGGC GCGCCGAGCC AGCCACCGGG GTCAACCGGA
ACGCCGCAGC GCCCACCGAC TCAGTCGCCG TGGCACGCGG CCGCTCCCGC CTCCACCCCT
CCAGCCGGCT CGGCCTTCGA CGCTGCGTAC CCGCCCACGC CGCCGGCGGC CGACCGGCCA
CTCGACCCGC CGACCGCAGC CCACCGGAAT CTTCGGCCCG CATCCCCGCC ACACTCGTCG
GAACCGGCCG CCCCTTCCCC CTCGCCGAGC CCGGTCAACC CACGCCGGCC CGCGTGGGAG
GGCACCTCAT CGACGGCTGA CGCCCCCACC GCGCTCATCC CCACGACACC GCTGCGGACC
GCAGCCCCGA ATGCCAGTCC CGCCCCGAAT GCCAGTCCAG CCCGGAGTGC CGGCGCGGCC
CCTGGTGCCG GTGCAGCCCC TGATGCCACC CCGGGCACCA GCCCCACCGC CGATCCGGCG
GCCACCGCGC TCATCCCGCG GGTGGCCAGC CACACGCCTC CGGCACTCGA CTCCACCGCC
CTGATGGGCG CCGTGCCCCA GCCACCCCGC GACGCCGACT CCACGGCCGA CTCCGCCACC
CCCGAGCCGG CCCAGCCGCG CCGGGGTGAG CGGGTGGTCA AGCTACGCCC AGAGCAGTCC
GCCCTCGGCT ACAAGAGCGT CTACTCGGAG CTGACCCGGC CGACGTTCCG GTCCCGCCTC
CGCACCGGCG TCCGCGCCGC CGGTGAGGTG CTCATCACCT TCGGCATAGT GGTGCTCCTC
TTCGCCGGGT ACGAGATCTG GGGGAAGTCG GTGATCGTCA ACGCCCACCA GAACGACCTC
AGCCAGCAGC TCGCCGAGGC GTGGGGGCCA ACCGGTGACC CGACTGTGAC GCCCTCCGCC
GCTTCCTCGT CCGCCTCCGC GCCACCGACG GTGCAGGGCA TTCCGATCGC CGGCCTGTAC
ATCCCGCGGC TCGACAAAAA CTGGATCGTC GTCGAGGGAG TGACCCAGAA GGACCTCCGA
TACGCTCCGG GCCACTACCC GACGAGCGCC CTCCCCGGCC AGCTCGGCAA CTTCTCCATC
GCCGGGCACC GGAACCGGGC CACCTTCTGG CGACTTGACG AGTTGGACGA CGGCGACGTG
ATCGTTGCCG AGGATCGGGA CGAGTGGCAC GTCTACCGCG TCACCCGCAA CCACGTCGTC
AAGCCGAGCG AGGTGGCGGT GGTGGCACCG GTTCCCGGCG AGCCGGGCGC CGAGCCGACC
GACGCGATGC TCACCCTGAC CACCTGCCAC CCGAAGTTCG ACAACTACGA ACGCCTGATC
ATCCACGCGA AGCTGGACCG GACGCAGGCC AAGTCGGCGG GCCGCCCGGC GGAACTGGGG
GGCTGA
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| Protein sequence | MTRASESWQP DRDDDQTAFL PRLERPWQQP RHESEQPSSP PGPAPQPPSQ PGALPQSGAP
SQPGALPQPG APSQPPGSTG TPQRPPTQSP WHAAAPASTP PAGSAFDAAY PPTPPAADRP
LDPPTAAHRN LRPASPPHSS EPAAPSPSPS PVNPRRPAWE GTSSTADAPT ALIPTTPLRT
AAPNASPAPN ASPARSAGAA PGAGAAPDAT PGTSPTADPA ATALIPRVAS HTPPALDSTA
LMGAVPQPPR DADSTADSAT PEPAQPRRGE RVVKLRPEQS ALGYKSVYSE LTRPTFRSRL
RTGVRAAGEV LITFGIVVLL FAGYEIWGKS VIVNAHQNDL SQQLAEAWGP TGDPTVTPSA
ASSSASAPPT VQGIPIAGLY IPRLDKNWIV VEGVTQKDLR YAPGHYPTSA LPGQLGNFSI
AGHRNRATFW RLDELDDGDV IVAEDRDEWH VYRVTRNHVV KPSEVAVVAP VPGEPGAEPT
DAMLTLTTCH PKFDNYERLI IHAKLDRTQA KSAGRPAELG G
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