Gene Strop_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0042 
Symbol 
ID5056474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp49150 
End bp49938 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID640472308 
ProductFHA domain-containing protein 
Protein accessionYP_001156905 
Protein GI145592608 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0179739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGG GACCCGAGGA GGAGCCGGTG AGCGTGCTGC AACGCTTCGA GAAGCGTCTG 
GAAGGCCTGG TCGAAGGGGC TTTCGCCAAG GTCTTCAAAG GGGTGGTCCA CCCCGTGGAG
ATCCTCAACG CCATGCAGCG GGAGGCCGAG GCGCACAAGG CGATCCTGGC CGGTGGGCGC
ACGTTGGTGC CCAACCGCTA CGTGATCGAT CTCTCGCCAT ACGACCACAG TCGTCTGGCG
CCGTACGCCG CCGCACTGGC CCAGGAGCTG GCCCAGTCGC AGGCGGAGTT CATCGGCGAG
CAGGCGTGGA CGGTCTACGG CGACGTGATC GTCGAGATCG AGCGGGGGGA GGGGCTCGAC
ACCGGCATGT TCCGGGTCAC CGCCGAGGTG TACACCGGCG GCGAGGTCGC CCCAGTGTCG
GGGCCGGGCT ACGACGCCGG TCCGCCGGCC TACCCCGCCT ACGAGCAGGG CGGTGGCTAC
GGCCAGCCGG CCGCTCAAGG TGGCGGCCAC AACGTGCGGC TGGTCTCCGG CGACGGGCGG
ACCTACCCGC TTCAGCTGGG CACGACCGTG ATCGGCCGCG GCGACCAGGC CACCCTGCGC
CTACCCGATG TCGGCATCTC GCGGCGACAC GCCCGGCTGG ATTTCGACGG TGGGCAGGTC
GTGCTGACCG ATCTCGGGTC GACCAACGGC ACCATGGTCA ACGGTCAGCG GGTCTCCGCC
GTCGCCCTGA ACCCCGGCGA CATGATCCAG CTCGGCACCA CGACGCTGAC CTTCCGCGTG
GACGGCTGA
 
Protein sequence
MSSGPEEEPV SVLQRFEKRL EGLVEGAFAK VFKGVVHPVE ILNAMQREAE AHKAILAGGR 
TLVPNRYVID LSPYDHSRLA PYAAALAQEL AQSQAEFIGE QAWTVYGDVI VEIERGEGLD
TGMFRVTAEV YTGGEVAPVS GPGYDAGPPA YPAYEQGGGY GQPAAQGGGH NVRLVSGDGR
TYPLQLGTTV IGRGDQATLR LPDVGISRRH ARLDFDGGQV VLTDLGSTNG TMVNGQRVSA
VALNPGDMIQ LGTTTLTFRV DG