Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0042 |
Symbol | |
ID | 5056474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 49150 |
End bp | 49938 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472308 |
Product | FHA domain-containing protein |
Protein accession | YP_001156905 |
Protein GI | 145592608 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0179739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTCGG GACCCGAGGA GGAGCCGGTG AGCGTGCTGC AACGCTTCGA GAAGCGTCTG GAAGGCCTGG TCGAAGGGGC TTTCGCCAAG GTCTTCAAAG GGGTGGTCCA CCCCGTGGAG ATCCTCAACG CCATGCAGCG GGAGGCCGAG GCGCACAAGG CGATCCTGGC CGGTGGGCGC ACGTTGGTGC CCAACCGCTA CGTGATCGAT CTCTCGCCAT ACGACCACAG TCGTCTGGCG CCGTACGCCG CCGCACTGGC CCAGGAGCTG GCCCAGTCGC AGGCGGAGTT CATCGGCGAG CAGGCGTGGA CGGTCTACGG CGACGTGATC GTCGAGATCG AGCGGGGGGA GGGGCTCGAC ACCGGCATGT TCCGGGTCAC CGCCGAGGTG TACACCGGCG GCGAGGTCGC CCCAGTGTCG GGGCCGGGCT ACGACGCCGG TCCGCCGGCC TACCCCGCCT ACGAGCAGGG CGGTGGCTAC GGCCAGCCGG CCGCTCAAGG TGGCGGCCAC AACGTGCGGC TGGTCTCCGG CGACGGGCGG ACCTACCCGC TTCAGCTGGG CACGACCGTG ATCGGCCGCG GCGACCAGGC CACCCTGCGC CTACCCGATG TCGGCATCTC GCGGCGACAC GCCCGGCTGG ATTTCGACGG TGGGCAGGTC GTGCTGACCG ATCTCGGGTC GACCAACGGC ACCATGGTCA ACGGTCAGCG GGTCTCCGCC GTCGCCCTGA ACCCCGGCGA CATGATCCAG CTCGGCACCA CGACGCTGAC CTTCCGCGTG GACGGCTGA
|
Protein sequence | MSSGPEEEPV SVLQRFEKRL EGLVEGAFAK VFKGVVHPVE ILNAMQREAE AHKAILAGGR TLVPNRYVID LSPYDHSRLA PYAAALAQEL AQSQAEFIGE QAWTVYGDVI VEIERGEGLD TGMFRVTAEV YTGGEVAPVS GPGYDAGPPA YPAYEQGGGY GQPAAQGGGH NVRLVSGDGR TYPLQLGTTV IGRGDQATLR LPDVGISRRH ARLDFDGGQV VLTDLGSTNG TMVNGQRVSA VALNPGDMIQ LGTTTLTFRV DG
|
| |