| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0032 |
|---|
| Symbol | |
|---|
| ID | 5056463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 39799 |
|---|
| End bp | 41100 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640472297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001156895 |
|---|
| Protein GI | 145592598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAC GCGGCTGGGC AATATCGATC ATGACCGCGC TTGGCACCGC CGCCGGGGCC
GGCGCCGCCG CGCTGGGCTT CGGCTACGGC CTGGGCATCA TCAACTGGGC CCCACCGCCC
GATGAGAGTG TCGCCGTCAC CGCCTGGACA GCCAGCCTGA TCTGGGCAAC GTGGATCGCC
GCCACTTCTA CTGTGGCTGG TGCCGTTTGC GCCCAACACC TCCGTCGTCG TGGCGCTGTG
GAACACCAGC AGGCCGGCAG CGACGGCACA ATTTCTATAA CGGACGCGAC ACTCGCCAGC
CCGAGTGGCC CGGACGCCGC CGCAGGGACC ACCCGGGAGA CGGCAGAGCG GAGCCGGGCC
GAGCCGAGTG AACCCGATGG TGCGCTCGGT AAGCTGGCGC TCGTCGGAGC CGCTGGATTC
GGCGCTCTGA TCACGGTGCT GTTGACCGCC GTACCGGCTC GGGTGGCCGT GGTACCCGGT
GTCGCCGCGC CCCGCGACGT CGCCGCTGGA TATGCCGCCC TGGGCGTCCT GGTCGGATTG
GCCATGGCCG GGTGGGCTCT ACACTCCCGC GCCGCCGCCA CCAACGTGAT GGCGACCGTC
GGCTGGCTGT GGCTACTCGC CGTGGTGGCT GTTGTGGACG GCGTCGTCGC GGGGCGGGGA
CTCCGTACCG CCCAGCTCGG CATTTGGCAG CTCAGTGCCG GCGGGAACGA GCTGTGGCTC
CGCGACTGGT TCTACTGGCC GGGCGCGCTG CTGTCACTCG GCTCCGCGCT TCTCATCGGC
ATACTGGTCG CCCGGGGCAC GGCCAGACGT CCCGACCAGC TGGTGGGTGC CACCGCCTCC
GGCGCAGCCG GCCCGCTCCT CGTCGCGGTC GCCTACCTGC TCGCCGTGCC GGAACTGGCC
GACCTCGCTC CCGGCCAGGC GTCGGCGCAC CTCATCGCCC CGTACGCGGT CATCATCGGC
TTTGGCGGCT CGGCGCTGGT CGCCGCGCTC GGCCAACGGG CCGACCGCCG GACGCGGACA
GCTTCGCCCC GACCGGTGGA GCCCGCGGCC GAATCGCCCC AGTCGGCAGA GTCCCCGACC
GACCCGCAGT CGGACGGTTC GACCGTCGCG ACGCCCACCA CTCGGGGCCG GACGCGCGGG
TCAGGCAGCC GACGGCCCCG AACCGCGAAG TCGGAGGCCA CCACCGCGGT GCCGGCACAG
CGCACTGTGG ACGATGCAGC AGCGGAGGAC GCCGGCCCCG GGTCACAGGA GCCGAAGGAG
ACGGACTCAC GTCGGCCCCG ATCCGCACGC CGCACCAGCT GA
|
|---|
| Protein sequence | MARRGWAISI MTALGTAAGA GAAALGFGYG LGIINWAPPP DESVAVTAWT ASLIWATWIA
ATSTVAGAVC AQHLRRRGAV EHQQAGSDGT ISITDATLAS PSGPDAAAGT TRETAERSRA
EPSEPDGALG KLALVGAAGF GALITVLLTA VPARVAVVPG VAAPRDVAAG YAALGVLVGL
AMAGWALHSR AAATNVMATV GWLWLLAVVA VVDGVVAGRG LRTAQLGIWQ LSAGGNELWL
RDWFYWPGAL LSLGSALLIG ILVARGTARR PDQLVGATAS GAAGPLLVAV AYLLAVPELA
DLAPGQASAH LIAPYAVIIG FGGSALVAAL GQRADRRTRT ASPRPVEPAA ESPQSAESPT
DPQSDGSTVA TPTTRGRTRG SGSRRPRTAK SEATTAVPAQ RTVDDAAAED AGPGSQEPKE
TDSRRPRSAR RTS
|
|---|
| |