Gene Strop_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0027 
Symbol 
ID5056458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp31857 
End bp33389 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content68% 
IMG OID640472292 
Productpropionyl-CoA carboxylase 
Protein accessionYP_001156890 
Protein GI145592593 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCG ACGGTGAGGC GCTGGAGCAG CTACGCAAGC GGGCCCGGGC TGGTGGCGCA 
GACAAGTACC ACGCGGCGAA TGCCGCGAAG GGCAAGCTCT TTGCCCGGGA GCGGGTCGCG
TTCCTGGTCG ACGAGGGTTC GTTCGTCGAG GATGGGCTCT ACGCCAACGC GCTGGCCGAG
GGCCTGCCCG CCGACGGGGT GATCACCGGA ACCGCCACCA TCGATGGCCG TCCGGTCTGC
GTGATGGCCA ACGACTCCAC GGTCAAGGCC GGCAGCTGGG GAGCCCGGAC CGTTGAAAAG
ATCATCCGGA TCATCGAGCG TGCCTACACG ACCAAGGTTC CGATGGTCTA CCTGGTCGAC
TCGGCCGGTG CGCGGATCAC CGATCAGGTC GATCTGTTCC CCGGCCGGCG TGGCGCCGGA
AAGATCTTTT GGAACCAGGT CCGGGCGTCT GGCTCGATCC CCCAGGTCTG CGCGCTCTTC
GGACCGAGCG CGGCCGGTGG GGCGTACATC CCGGCTTTCT GTGACGTGGT CGCCATGGTC
GAGGGAAACG CCAGCATGTA CCTGGGCTCG GACCGCATGG TCGAGATGGT CACCGGAGAG
CAGACGACGC TGGAGGCGAT GGGCGGGGCC CGGGTGCACT GCGCGGAGTC CGGCGTCGGC
CACTTCCTCT GCCGGAGCGA GGCCGACGCG CTCGACGTCG TGCGGCGCTA CCTGTCGTAC
CTGCCGACAA ACTGGACCGA GCAGCCGCCC GCGGTGCCCG CCGTCGAAGC CCCGGCGAAG
GTCGATCTGG CCGCGCTGGT GCCGGCCAGC GAGCGGCAGG CGTTCGACAT GCGCCGTTAC
GCGAAGGGGC TACTCGACCA GGGGAGCTTC TTTGAGATCC AGGCGCTGTG GGCCAAGGAG
CTGACCATCG GCTTCGGCCG GCTCAACGGC GAGGTCGTTG GCGTCGTCGG CAACAATTCG
ATGTTCAAGG GGGGCGTGCT CTTCGTCGAC TCGGCCGACA AGGCGACGCG GTTCGTGCAG
CTCTGTGACG CCTTCAACGT GCCGTTGCTG TTCCTCTCCG ACGTGCCCGG GTTCATGGTC
GGCAGCACGG TGGAGAAGCA GGGCATCATC CGGCATGGCG CCAAAATGAT CACTGCGATC
TCCGAGGCGA CCGTGCCCAA GATCTGCGTG GTGGTGCGCA AGGCCTACGG CGCCGGCCTC
TACGCGATGG CCGGCCCCGG GTTCGAGCCG GACGCCACGA TCGCCCTGCC GACCGCGAAG
ATCGCCGTTA TGGGTGCGGA GGCGGCGGTA AACGCGGTCT ACGCCAACAA GATCGCGGCT
ATCGGGGACG AGAGCGAACG GGCCGCCTTC GTCGCCGCTC GGCGCGAGGA GTACGAGCAG
GACATTGACA TCGTCCGGCT CGCCAGCGAG CTGGTGATCG ACGCGATCGT GGAACCACCC
GAGCTGCGCG GTGAGCTGAT TCGCCGGTTC GCCGCCGCCC GCGACAAGGA TCGCCACTTC
GCCACCCGCC GGCACGGCGT CACCCCCGTC TGA
 
Protein sequence
MTLDGEALEQ LRKRARAGGA DKYHAANAAK GKLFARERVA FLVDEGSFVE DGLYANALAE 
GLPADGVITG TATIDGRPVC VMANDSTVKA GSWGARTVEK IIRIIERAYT TKVPMVYLVD
SAGARITDQV DLFPGRRGAG KIFWNQVRAS GSIPQVCALF GPSAAGGAYI PAFCDVVAMV
EGNASMYLGS DRMVEMVTGE QTTLEAMGGA RVHCAESGVG HFLCRSEADA LDVVRRYLSY
LPTNWTEQPP AVPAVEAPAK VDLAALVPAS ERQAFDMRRY AKGLLDQGSF FEIQALWAKE
LTIGFGRLNG EVVGVVGNNS MFKGGVLFVD SADKATRFVQ LCDAFNVPLL FLSDVPGFMV
GSTVEKQGII RHGAKMITAI SEATVPKICV VVRKAYGAGL YAMAGPGFEP DATIALPTAK
IAVMGAEAAV NAVYANKIAA IGDESERAAF VAARREEYEQ DIDIVRLASE LVIDAIVEPP
ELRGELIRRF AAARDKDRHF ATRRHGVTPV