Gene Strop_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0024 
Symbol 
ID5056455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp28458 
End bp29039 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content71% 
IMG OID640472289 
ProductTetR family transcriptional regulator 
Protein accessionYP_001156887 
Protein GI145592590 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG GCCGGCGTCG GTCTCGCAAG GACGAGATCC TGGGGATCGC GGTCGGGCTG 
TTCGCCGCCC GGGGCTACCA CGGCGTGTCG ATGGATGACA TTGGCGCCGC CGCCGGGGTG 
ACCGGTCCGG CGCTCTACCA CCACTTCGCC GGCAAGGAGG CGATGCTGGT CGCCGCGTTG 
ATCCCGGTCA GCGAAGGGCT GCTCGCCGGC GGTCGGGAGC GGGCCGCCGC CCACCCCGAC 
GATCCCCGCG CCGCGTTGGA GTCACTGATC GAATTCCATG TCGACTTCGC GCTGGCCCAA 
CCGGCGGTGA TCGCTCTGCA CCTGCACGAG CTGGACCGGC TGCCCGAACA GCCGCGTCGC 
CGCATCCGCC GGCTCCAGCG GCTGTACGTC GAGGAGTGGG TCAGTGTGCT GACCGCGTCG 
CACCCGGGCC TGTCCGACAA CGAGGCGCGG GTGCTGGCCC ACGCCGCCTT CGGTCTGATG 
AACTCGACCC CGTTCCTCGG CGGTGAGGTG GACCGGCAAC GCCGGGCCGA GTTGCTCCGG 
GGCGCGACGC TGGCTGCTCT GTTGGCACCG ACAGCACGTT GA
 
Protein sequence
MGSGRRRSRK DEILGIAVGL FAARGYHGVS MDDIGAAAGV TGPALYHHFA GKEAMLVAAL 
IPVSEGLLAG GRERAAAHPD DPRAALESLI EFHVDFALAQ PAVIALHLHE LDRLPEQPRR 
RIRRLQRLYV EEWVSVLTAS HPGLSDNEAR VLAHAAFGLM NSTPFLGGEV DRQRRAELLR 
GATLAALLAP TAR