Gene Strop_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0014 
Symbol 
ID5056445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp15519 
End bp16367 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content72% 
IMG OID640472279 
Productphenazine biosynthesis PhzC/PhzF protein 
Protein accessionYP_001156877 
Protein GI145592580 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.983062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATAC GCGCCATCCC CGGTCTGTCG GGCAACGAGT TGTGGCAGGT ACGGGTCTTC 
GTGGGGCCCG ACGCCATGGG AAACGTCACC GGCGTGGTGA CGGTGGGATC GGGCACGCGG
CCCGACGACA TGGCGGCCGG TGCGCGCCTG CTCGGCTACC CCGAGACGGC GTTCGTACGC
CAGGACGCTG GCTCCGTGCA CGTCACCAGC TACTCGCCCT ACGAGCGGCT GCGGTTGTGC
ACCCAGACGC TGCTCGCCAC CGAGCACGTG CTGCGGTCCC GGCGGACCTC CGGCGCGAAG
CTGCTGGCCG GCACAGACGT GGGTGAGGTG CCGGTGCGCC GGTACGAGGA CATGGCGTAC
GTCGTCCTCA CCGGCGAACG TACCCGTGTC CGGGCAGCCC ATTCCCGGCT ACCGCTCGAC
GGCGTCGTCC ACGACGACGC GCTCGTCGTG GACACCGGCC GCTCCCGCAG CTACGTCAAC
CTGTCGGCGG ACACATTGGA GGCGGTCTGG TTGGATCCCG CCGCCGTGCT GAGCTACTGC
GCTGCGGAGG GCGTCAGCGG GATCTGTCTG GTCGCCCGCC TCGACAACGC GGTCCGGCTG
CGCGTGTTCA CCACCTCCCT GGCCGGCGCG GAGGATGTGG CCACCGGAGG GGCTGCCGGC
GGTCTGCCGG CATTTCTCGC GGCTACCGGC GGTGGCTCCC GGCGGCCGGT TCTGGTCCGG
CAGGGACACG GGACCGCCCT GACCCGGGGC GAGCTGCACG TGCGTCCGCT CGATGGTGCG
GAGGTCGCCG TCGGGGGGCG GGTGGTCGCG GTGTCGACGG GGCGACTGGA CCCGTGCCGT
CTACCGTGA
 
Protein sequence
MVIRAIPGLS GNELWQVRVF VGPDAMGNVT GVVTVGSGTR PDDMAAGARL LGYPETAFVR 
QDAGSVHVTS YSPYERLRLC TQTLLATEHV LRSRRTSGAK LLAGTDVGEV PVRRYEDMAY
VVLTGERTRV RAAHSRLPLD GVVHDDALVV DTGRSRSYVN LSADTLEAVW LDPAAVLSYC
AAEGVSGICL VARLDNAVRL RVFTTSLAGA EDVATGGAAG GLPAFLAATG GGSRRPVLVR
QGHGTALTRG ELHVRPLDGA EVAVGGRVVA VSTGRLDPCR LP