| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0008 |
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| Symbol | |
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| ID | 5056437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 7788 |
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| End bp | 9947 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640472271 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001156871 |
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| Protein GI | 145592574 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.107754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00597045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCG GGGCCGGCCC GGGCCCGAGA TCATCGTCCC ACATCAGGTC GAGCCGATCG
CGATCCGCGG GCAACCGCGG CGGCCGGCGC GTTCGACCCC CAGCCCGGAT GACTCTCCGG
TGCCGGTCCG CGCGCCCGAC GTCGCGTCCT GTCCGCCGAA CCCCGCGACC GGTCGTGCCA
AATGGCGTGG CCGACGCGAG AAAGTGGCCG AGGGTGGCAG CGCAGGACAA GCAGGAGTAC
GGCGCCGAGT CGATCACCGT CCTCGAAGGG CTGGAGGCGG TCCGCAAGCG CCCCGGTATG
TACATCGGGT CCACCGGCGA ACGCGGTCTG CACCACCTGG TGTGGGAGGT CGTGGACAAC
GCGGTGGATG AGGCGCTGGC CGGGCACTGC GACACCATTG ACGTGGTGCT GCTCGCCGAC
GGCGGGGTTC GGGTCACTGA TAACGGCCGT GGTTTCCCGG TCGACCCGCA TCCGAAGCTC
AAGAAGCCGG GCGTCGAGGT GGCACTGACC GTGCTGCACG CCGGCGGAAA GTTCGACGGC
AAGGCGTACG CCGTCTCCGG TGGCCTGCAC GGCGTCGGGG TGTCGGTCGT GAACGCCCTC
TCCACCCGGA TGGCCGTCGA GATCCAGAAG GACGGCTACG TCTGGCGGCA GTCGTACACG
GACTCGAAGC CGACGCCGTT GGAGAAGGGT GAGTCGACCG ACGCCACCGG CTCGGCGGTC
TCCTTCTGGC CCGATCCCAG GGTCTTCGAG ACGGTTGCCT TCGACTTCCA GACCATCTAC
CGCCGGCTCC AGGAGATGGC CTTCCTCAAC CGCGGTCTCA CCATCCACTT CCTCGACGAG
CGAGTCGACG AGGGCGACGA TGGCAAGATG CGGGAGGTCA CCTTCTGCTA CCAGGGTGGC
ATCGCCGACT TCGTCCGGCA CCTCAACGCT TCGAAGACCT CGATTCACAA GTCGGTGGTC
GAGTTCGGCA CCGAGGAAGA CGGCATGTCG GTCGAGATCG CCATGCAGTG GAACGAGTCG
TATGGCGAGT CGGTCTACAC CTTCGCCAAC AACATCAACA CGCATGAGGG CGGCACCCAC
GAGGAAGGCT TCCGATCGGC GCTGACCAGT GTCATCAACC GGTACGGTGC GGAGAAGCGG
CTGCTCAAGA GTGACGAGAA GCTCTCGGGG GAGGATATCC GGGAGGGACT GGCGGCGATC
ATCTCGGTGA AGCTGACCAA CCCGCAGTTC GAGGGGCAGA CCAAGACCAA GCTGGGCAAC
ACGCCGGTCA AGAGTTTCGT GCAGCGGGTC TGCAACGAGT GGCTGGTTGA CTGGCTGGAC
CGTAACCCGG CCGAGGCGAA GGTCATCATC ACCAAGGCAT CCCAGGCGGC ACGTGCCCGG
GTCGCCGCCC AGCAGGCCCG TAAGTTGGCC CGCCGTAAGT CGCTGCTGGA GTCCGGCTCG
ATGCCGGGTA AGTTGGCCGA CTGCCAGTCG ACCGATCCCC GCGAGTGCGA GGTCTTCATC
GTTGAGGGCG ACTCGGCGGG CGGCTCCGCC AAGCAGGGAC GCGACCCGCG GACGCAGGCG
ATCCTGCCGA TCCGCGGCAA GATCCTCAAT GTGGAGAAGG CGCGGATCGA CCGGGTCCTG
AAGAACAACG AGGTCCAGGC GCTGATCACC GCGCTCGGCA CCGGCATCCA CGACGACTTC
GACATCGAGA AGCTGCGGTA CCACAAGATT GTGTTGATGG CCGACGCGGA TGTCGACGGT
CAGCACATCC AGACGTTGTT GCTGACTCTG CTCTTCCGCT TCATGCGACC ACTGGTCGAG
TTGGGGCACG TCTACCTGGC CGCCCCGCCG CTCTACAAGA TCAAGTGGAA TCGGAAGGGG
GACGATGCGC AGTACGCTTA CTCCGACCGA GAGCGGGATG GGTTGATCGC CCTGCGGCAG
CAGAAGAAGC CCAACGCCAA GCCGGACGAC ATCCAGCGGT TCAAGGGGCT CGGCGAGATG
AACTATCCCG AGCTTTGGGA GACCACGATG AACCCGGCTA CGCGTACCCT GCGGCAGGTC
ACGCTCGACG ACGCGGCGAC CGCGGACGAG CTGTTCAGCG TGCTGATGGG GGAGGATGTC
GAGGCTCGTC GCTCGTTTAT CCAGCGTAAT GCCAAGGACG TGCGGTTCCT GGACATCTGA
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| Protein sequence | MKPGAGPGPR SSSHIRSSRS RSAGNRGGRR VRPPARMTLR CRSARPTSRP VRRTPRPVVP
NGVADARKWP RVAAQDKQEY GAESITVLEG LEAVRKRPGM YIGSTGERGL HHLVWEVVDN
AVDEALAGHC DTIDVVLLAD GGVRVTDNGR GFPVDPHPKL KKPGVEVALT VLHAGGKFDG
KAYAVSGGLH GVGVSVVNAL STRMAVEIQK DGYVWRQSYT DSKPTPLEKG ESTDATGSAV
SFWPDPRVFE TVAFDFQTIY RRLQEMAFLN RGLTIHFLDE RVDEGDDGKM REVTFCYQGG
IADFVRHLNA SKTSIHKSVV EFGTEEDGMS VEIAMQWNES YGESVYTFAN NINTHEGGTH
EEGFRSALTS VINRYGAEKR LLKSDEKLSG EDIREGLAAI ISVKLTNPQF EGQTKTKLGN
TPVKSFVQRV CNEWLVDWLD RNPAEAKVII TKASQAARAR VAAQQARKLA RRKSLLESGS
MPGKLADCQS TDPRECEVFI VEGDSAGGSA KQGRDPRTQA ILPIRGKILN VEKARIDRVL
KNNEVQALIT ALGTGIHDDF DIEKLRYHKI VLMADADVDG QHIQTLLLTL LFRFMRPLVE
LGHVYLAAPP LYKIKWNRKG DDAQYAYSDR ERDGLIALRQ QKKPNAKPDD IQRFKGLGEM
NYPELWETTM NPATRTLRQV TLDDAATADE LFSVLMGEDV EARRSFIQRN AKDVRFLDI
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