Gene Strop_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0007 
Symbol 
ID5056436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp6924 
End bp7505 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID640472270 
Producthypothetical protein 
Protein accessionYP_001156870 
Protein GI145592573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00177743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00347145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGCTGG ATAACGTCGT GGTGAACTGG CCGCGGACCG GCCGCTTCTA CGACCCGGTC 
GCGCCGGCCG AGTTCGTGGA CTTCGGCGAG ATCGTCGACA TGCCGCAGAT CTCCGCGCCG
ACGGCCGCGC TCGCCGAACT GATCGCCAAG ACCGGCACGG TCCGGGCGAC CGCGTACACC
GAACTGGTCG ATCTGATCCT CGGCTTGGAG AATGTGCTCT ACGCCACAGA TCACTCGGCG
GAAGACGAGG ACCCGGTGAT CGACCCGGAC GGCTGCGGGT GGATCGCCGA CGGAGTCGAG
CGGTTCGTGG CCCGGCATCG AGCAGTCGGG GAGGCGGTCA CCTTCGACAC CGTCAGCGAG
GTGCTCCGCG CGTTACTCGG CGACGGACGC CTGGCCGAAC AGCAGCTGCG CTGGCTGGAC
AGCCGGCTGG ACCGGCTCCG CGACGAAAGC GGGGATCCGC CGCAGTGGAC CTTCACCTGC
GCGGAGCTGA GCGTACTCGC CGCGTTCTAC CGCCGCTGCG CCGAGCGGGG CTTCGCGGTC
TACGCCGAGT CGGTGGCACC CCGCCGGGCC GTTCAGCCGT AG
 
Protein sequence
MGLDNVVVNW PRTGRFYDPV APAEFVDFGE IVDMPQISAP TAALAELIAK TGTVRATAYT 
ELVDLILGLE NVLYATDHSA EDEDPVIDPD GCGWIADGVE RFVARHRAVG EAVTFDTVSE
VLRALLGDGR LAEQQLRWLD SRLDRLRDES GDPPQWTFTC AELSVLAAFY RRCAERGFAV
YAESVAPRRA VQP