Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0007 |
Symbol | |
ID | 5056436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 6924 |
End bp | 7505 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472270 |
Product | hypothetical protein |
Protein accession | YP_001156870 |
Protein GI | 145592573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00177743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00347145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGGCTGG ATAACGTCGT GGTGAACTGG CCGCGGACCG GCCGCTTCTA CGACCCGGTC GCGCCGGCCG AGTTCGTGGA CTTCGGCGAG ATCGTCGACA TGCCGCAGAT CTCCGCGCCG ACGGCCGCGC TCGCCGAACT GATCGCCAAG ACCGGCACGG TCCGGGCGAC CGCGTACACC GAACTGGTCG ATCTGATCCT CGGCTTGGAG AATGTGCTCT ACGCCACAGA TCACTCGGCG GAAGACGAGG ACCCGGTGAT CGACCCGGAC GGCTGCGGGT GGATCGCCGA CGGAGTCGAG CGGTTCGTGG CCCGGCATCG AGCAGTCGGG GAGGCGGTCA CCTTCGACAC CGTCAGCGAG GTGCTCCGCG CGTTACTCGG CGACGGACGC CTGGCCGAAC AGCAGCTGCG CTGGCTGGAC AGCCGGCTGG ACCGGCTCCG CGACGAAAGC GGGGATCCGC CGCAGTGGAC CTTCACCTGC GCGGAGCTGA GCGTACTCGC CGCGTTCTAC CGCCGCTGCG CCGAGCGGGG CTTCGCGGTC TACGCCGAGT CGGTGGCACC CCGCCGGGCC GTTCAGCCGT AG
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Protein sequence | MGLDNVVVNW PRTGRFYDPV APAEFVDFGE IVDMPQISAP TAALAELIAK TGTVRATAYT ELVDLILGLE NVLYATDHSA EDEDPVIDPD GCGWIADGVE RFVARHRAVG EAVTFDTVSE VLRALLGDGR LAEQQLRWLD SRLDRLRDES GDPPQWTFTC AELSVLAAFY RRCAERGFAV YAESVAPRRA VQP
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