Gene Strop_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0006 
Symbol 
ID5056435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp6337 
End bp6933 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content77% 
IMG OID640472269 
Producthypothetical protein 
Protein accessionYP_001156869 
Protein GI145592572 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00159718 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00351653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGGATG AGGTGGTGCC CGCCGCCGGA CCCCGCGGGG GGTCGGCGAC CGGCGCGGAC 
GGGTCTGCCC CGGCGGCTAC TGGCGGGGCC GAAGAACCGG CCGGGCCGCA ACTCGCACGG
GCCGTGCTGG ATGCGGCGAA GGCTCGGCGT CAGGCGGCGC AGCCGCAACG GCGCAGCCGC
AACGGTGGGG CGAGCGGTGG GGGGCGACGG CCGCGGGGCT ACTCCGGCCC GGGGCCGGAT
CCGCGCGACC CGCAGCCGCT CGGCGCGGTA CTGGACCGGC TGGTGAAGGC CCGGGGCTGG
CAACAACCGG CGGCCGAAGC GACGGTCTTT GGCGCCTGGG AACGGGTGGT CGGCCCGGAC
GTGGCCCAGC ACAGCCGGCC GGTAAAGCTG GACGGTGGTG AGCTGACCGT GGAGGCACGC
TCGACCGCCT GGGCCACCCA GCTCCGGCTG CTCGCCGGCT CGCTGCTGCA ACAGATCGCC
CGCGAGGTGG GCCACAACGT CGTACGCCGA CTACACATCC ACGGTCCGGC CGCGCCGTCC
TGGTCGCGTG GCCCTCGTCG GGTGCGGGGC CGCGGCCCCC GGGACACCTA CGGCTGA
 
Protein sequence
MSDEVVPAAG PRGGSATGAD GSAPAATGGA EEPAGPQLAR AVLDAAKARR QAAQPQRRSR 
NGGASGGGRR PRGYSGPGPD PRDPQPLGAV LDRLVKARGW QQPAAEATVF GAWERVVGPD
VAQHSRPVKL DGGELTVEAR STAWATQLRL LAGSLLQQIA REVGHNVVRR LHIHGPAAPS
WSRGPRRVRG RGPRDTYG