Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0001 |
Symbol | |
ID | 5061084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 625 |
End bp | 2388 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472264 |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_001156864 |
Protein GI | 145592567 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000718914 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000588843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGGATA CAACCGACCT CGCCGCGGTG TGGACGGCAA CGACCGACGA GTTGGCCGAC GAGATCGTCT CTGCCCAGCA GCGGGCCTAT CTGCGACTGA CCCGCCTCCG CGCCATCGTC GAGGACACCG CGCTCGTCTC CGTCCCGGAC GCCTTCACCC GAGATGTCAT CGAGTCCCGG CTCCGCCCGG CGATCACCGA GGCCCTCACC CGCCGGCTGG GGCGCCCCAT CCAGGTGGCG GTCACGGTGC GAGCACCGGA AGACGCCCCC GGCCGCCCGG CCGGCACCAT CTACCACAGC GCCCCGAGCC CGGAGACCGG CGCGTTGCCC GGCGACACCA CCGACCGCGC CGCGGGAGGG GGCCCGGACG ACGGCGTGGA CCACAGGTTC CCGCTGATCC CCGGGCAGGC CCAACCGGAG CGCCGCACTG CGGCGCCCGC TGGTTCGTAC GGCGAGCAGA CGACGCCGAT GTCCCGGGAC AGCCAGGAGC CGTTGTTCAG CTCCGCCTTC GCCGGGCCGC CCCGAGGCGA GCGTCACGAT GTTGACGAGC AGGCCCGGCT GGGCCCACCG GTGACCGAAC GCCCGTTCGA GGCCCACTAC CGAGCAGAGG GGGCGGACCA GCACGGGGGG CGGGCCCTGC CCCGGGAACT CGGCACCGAC AGCGGGCCGG GGAGGGTGGA CCACCGACCG GGTGGCCGCG AGGACCGTCG GCCACCGGCA CCCGCCGACG GCGGCGGCAA CCGGCTCAAC CCGAAGTACA TGTTCGAGAC GTTCGTTATC GGTTCGTCGA ACCGATTCGC CCACGCGGCT TCGGTGGCGG TCGCCGAGTC ACCGGCGAAG GCGTACAACC CGCTGTTCAT CTACGGCAGC TCAGGGCTGG GCAAGACGCA CTTGCTGCAC GCGATCGGCC ACTACGCCAC GACGCTCGGC AACGCCAACT CGGTCCGGTA CGTCTCGACC GAGGAGTTCA CCAACGACTT CATCAACTCG CTGCGCGACG ACAAGACCAG CGCCTTCCAG CGCCGGTACC GGGACGTCGA CATCCTCCTG ATCGACGACA TCCAGTTCCT GGAGAACCGG GAGCGGACGC AGGAGGAGTT CTTCCACACC TTCAACACAC TGCACAACGC CAACAAGCAG ATCGTGATCA CCTCCGACCG GTCGCCGAAG CAGCTGGCGA CTCTGGAGGA CCGGCTGCGG ACCCGGTTCG AATGGGGCCT ACTCGCCGAC ATCCAGCCGC CAGACCTGGA GACCCGGATC GCGATCCTCC AGAAGAAAGC CGCCCAGGAA CGGCTGTTCG CCCCGCCGGA CGTACTGGAG TTCATTGCGT CCCGAGTGTC GAACTCCATC CGAGAACTTG AGGGTGCGCT GATCCGGGTC ACCGCGTTCG CCAGCCTCAC CCGGTCATCG GTGGAGTTGT CGCTGGCCGA GGAGGTGCTG CGGGACTTCA TTCCGGACGG CACCGGGCCA GAGATCACCG CCGACCAGAT CATGGTTGCC ACCGCCGACT ACTTCGGGGT GAGTCTGGAG GACCTGCGCG GGCACTCCCG CTCGCGGGTG CTCGTCAACG CCCGCCAGGT CGCCATGTAC CTGTGCCGGG AGCTCACCGA CCTGTCGCTG CCCCGAATCG GACAGGCGTT CGGGGGCCGC GACCACACCA CGGTCATGCA CGCCGACCGC AAGATCCGTC AGCAGATGGC CGAGCGCCGG TCGCTCTACA ACCAGATCGC CGAGCTGACC AACCGGATCA AGCAGAACAC CTGA
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Protein sequence | MTDTTDLAAV WTATTDELAD EIVSAQQRAY LRLTRLRAIV EDTALVSVPD AFTRDVIESR LRPAITEALT RRLGRPIQVA VTVRAPEDAP GRPAGTIYHS APSPETGALP GDTTDRAAGG GPDDGVDHRF PLIPGQAQPE RRTAAPAGSY GEQTTPMSRD SQEPLFSSAF AGPPRGERHD VDEQARLGPP VTERPFEAHY RAEGADQHGG RALPRELGTD SGPGRVDHRP GGREDRRPPA PADGGGNRLN PKYMFETFVI GSSNRFAHAA SVAVAESPAK AYNPLFIYGS SGLGKTHLLH AIGHYATTLG NANSVRYVST EEFTNDFINS LRDDKTSAFQ RRYRDVDILL IDDIQFLENR ERTQEEFFHT FNTLHNANKQ IVITSDRSPK QLATLEDRLR TRFEWGLLAD IQPPDLETRI AILQKKAAQE RLFAPPDVLE FIASRVSNSI RELEGALIRV TAFASLTRSS VELSLAEEVL RDFIPDGTGP EITADQIMVA TADYFGVSLE DLRGHSRSRV LVNARQVAMY LCRELTDLSL PRIGQAFGGR DHTTVMHADR KIRQQMAERR SLYNQIAELT NRIKQNT
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