| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2085 |
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| Symbol | |
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| ID | 5053348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2156916 |
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| End bp | 2158589 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640472260 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001156860 |
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| Protein GI | 145590263 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.39067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTA AAAAAACGAT TCTTTGGGCT GTGTTTTCGC TGTCAGGTCT CATGCTTTAC
AACAATTGGC AGGTTCATGA GGGCAAACCT TCTATGTTTG GGGGTGCTCC AGCCACTACA
GCAAGTGCGC CAAATAAATC GGGCGCCCCT GCCAAGCTAG ATACACCAGT AGCAATTTCA
GGCATTCCTT CAGTCACGCA AACACCTACA GCAAATTCTG CTCCCGTAGA GAGCACCCAA
AAATTTGTTT TAGAAAATGA ACTACTCTCC GTTGAGATCA GCGCGGCTGG TGCAAATGTA
GTTGACGCAA AACTGTTGAA GGAATTAACG GCCGATCAAA AGCCAGTTGA AATATTTCAA
CACACACCTA CACATACTTA TGTTGCGCGC TCTGGTTTAG TTGCGGTAGG CAATACAGAT
TTGCCAAATC ACACCAGCCT ATTCAAGTTA GATCGCTCCG GCAAAGATGG TTCTGGAAGA
CCATTTCTGG TTCTTTCTAG CGAGCGTAAT GGCGTCAAGC TAGAAAAAAC ATTCCTCTTA
AATCCTGGAA GCTATGACAT CTATGTTGGT CATCGAGTAA CTCAAGTTAC TCCAAACGGC
GCACCATTAA TTCTTTATAC CGAAATTGTT CGCGATGGAT CGGAAGAGAA AAAAATTGGC
CCTTTCGGTG GAGCCTTCTC AGCGAGCACC TTTACTGGCC CAGCAATTTA TACCGATGGA
GGCAAATATA AAAAAGTTTC ATTTGCTGAT ATAGAAAAAA ATAAATTTAC TGCACCCTCA
CAAATTGCAG CAGGACAGCC TGGCTGGGTT GCCATGGTTC AGCATTATTT TGCTAGCGCT
TGGATTCCAG ACGATAAATT ACCGCGTGAT ATTTATTCTG GAAAAATTGA TAATGACCTG
TATCGCGTGG GTATGCAAAC CCAGCTTGGC ACCATTGCTA CTGGTACTAC GGTAATGGCT
AATGCCCAAT TATTCGTTGG CCCACAAGAA GAGCGCATGC TGGAAACGAT TGCGCCGGGG
CTTGAGTTAT TAAAAGATTA CGGCTATCTC ACTATTCTGG CTAAACCAAT TTTTTGGTTG
TTAGAGCATA TTCACAACAT TGTGGGTAAT TGGGGTTGGT CAATCATCCT TCTTACTGTT
TTGATTAAAT TGGCGTTCTT CCCGCTTTCA GCAGCCAGTT ATAAATCTAT GGCGCGCATG
AAAGAGGTTC AGCCTCGCTT GGCGGCCATG AAAGAGCAGT ACAAGGGGGA GCCACAAAAA
CTCAACCAAG CAATGATGGA GATGTATCGC AAGGAAAAAA TCAACCCACT AGGGGGTTGT
TTGCCAGTAG TGATTCAGAT CCCTGTGTTT ATTTCTTTGT ATTGGGTGCT GCTGTCGTCT
GTAGAGATGC GTGGCGCACC ATGGATTTTA TGGATTCATG ATTTATCAGT GCCAGACCCT
TACTATATTT TGCCGGTGGT TATGGCGGTA TCGATGTTTG TGCAAACCAA ACTTAACCCG
ACACCACCTG ATCCTGTTCA GGCCAAAGTC ATGATGTACA TGCCTATCGT TTTCTCGATC
ATGTTCTTCT TCTTCCCTGC GGGCTTGGTT TTATATTGGG TAACCAACAA CCTGTTGTCT
ATTGCTCAGC AATGGCAAAT CAACCGCTTG TTTGGAAAGA AGCCTGCCAA ATAA
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| Protein sequence | MDFKKTILWA VFSLSGLMLY NNWQVHEGKP SMFGGAPATT ASAPNKSGAP AKLDTPVAIS
GIPSVTQTPT ANSAPVESTQ KFVLENELLS VEISAAGANV VDAKLLKELT ADQKPVEIFQ
HTPTHTYVAR SGLVAVGNTD LPNHTSLFKL DRSGKDGSGR PFLVLSSERN GVKLEKTFLL
NPGSYDIYVG HRVTQVTPNG APLILYTEIV RDGSEEKKIG PFGGAFSAST FTGPAIYTDG
GKYKKVSFAD IEKNKFTAPS QIAAGQPGWV AMVQHYFASA WIPDDKLPRD IYSGKIDNDL
YRVGMQTQLG TIATGTTVMA NAQLFVGPQE ERMLETIAPG LELLKDYGYL TILAKPIFWL
LEHIHNIVGN WGWSIILLTV LIKLAFFPLS AASYKSMARM KEVQPRLAAM KEQYKGEPQK
LNQAMMEMYR KEKINPLGGC LPVVIQIPVF ISLYWVLLSS VEMRGAPWIL WIHDLSVPDP
YYILPVVMAV SMFVQTKLNP TPPDPVQAKV MMYMPIVFSI MFFFFPAGLV LYWVTNNLLS
IAQQWQINRL FGKKPAK
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