Gene Pnuc_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2076 
Symbol 
ID5053694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2145365 
End bp2145946 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID640472251 
Productputative periplasmic ligand-binding sensor protein 
Protein accessionYP_001156851 
Protein GI145590254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAA GAATTAAGCA ATTCATCCTT TTGTGTTTTA TAGCGTTGGG TGTTTTATCG 
GGCACCGCGA ACGCTGAGGG CATCAAAATT AAATCCTTCG AATTAGAAAG GGTTGAAAAC 
GACTGGTTCT TAAGTGCCGC ATTTCAAATT GAACTTTCAC CAGGACTTGA AGATGCAGTT 
CACAAAGGGG TAGTTTTATA TTTCCAAACA GAGTTCGATG TAACGCGTGG ACGCTGGTAT 
TGGTTTGATG AAAAACCTGC ATTTGCACAA AGACAAACCC GCCTGTCCTA TCAGCCGCTT 
ACTCAGCAAT ACCGCATTGC TTCGGAGGGC TTTACTTTTT CAGCAAAAAC AATTTCAGAA 
GCCTTGCAGG CTGTTGGCAG TATTGGTGGT TGGAGAGTCG TTGACAATGG TCAGCTCGAT 
ACCAGCAAGT CTTATGTTGC AGGTTTACGG ATGACCTTAG ATTTAAGTAA GCTCCCCAAG 
CCGTTTCAGG TCAATGCATT AAATAATCGC GATTGGAATG TATCTAGTGA CTGGCTTCGC 
TTCCCCTTTT CTCCTTTGGG GCCCACCCCA ATTAAGCAAT GA
 
Protein sequence
MSRRIKQFIL LCFIALGVLS GTANAEGIKI KSFELERVEN DWFLSAAFQI ELSPGLEDAV 
HKGVVLYFQT EFDVTRGRWY WFDEKPAFAQ RQTRLSYQPL TQQYRIASEG FTFSAKTISE 
ALQAVGSIGG WRVVDNGQLD TSKSYVAGLR MTLDLSKLPK PFQVNALNNR DWNVSSDWLR 
FPFSPLGPTP IKQ