Gene Pnuc_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2054 
Symbol 
ID5053899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2122152 
End bp2122571 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content48% 
IMG OID640472228 
ProductCHRD domain-containing protein 
Protein accessionYP_001156829 
Protein GI145590232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.332284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG CTCATGTTTT GGCAAAAGTT GTTTTGGGAT TGTGTGTTGG CGTTGCTTCA 
TTAGCCGCTT CAGCACAGTC AATGAAGGTA ACTCTTATTG GCTCTCAAGA GGTGCCTCCA 
GTGATGACCT CAGCTTCTGG GGTAGGCGCA ATCATGGTTG CTCCAGACGG TGCGGTGTCG 
GGAACCATCA CAACGACAGG TATTGAGGGA ACCATGGCGC ATATTCATGA GGCACCGATG 
GGTCAAAATG GTCCAGTTAT TGTTCCGTTT GCCAAGACTT CAGATAATGT TTGGACTGCC 
CCCGCTGGTG CCAAATTAAC GGATGCCCAG CTCCAAAGCT TGAAAAGCGG CAATCTTTAC 
CTCAATGTTC ATAGCGCCAC TAATAAATCT GGTGAAATCA GAGCTCAGCT AAAGCCGTAA
 
Protein sequence
MKIAHVLAKV VLGLCVGVAS LAASAQSMKV TLIGSQEVPP VMTSASGVGA IMVAPDGAVS 
GTITTTGIEG TMAHIHEAPM GQNGPVIVPF AKTSDNVWTA PAGAKLTDAQ LQSLKSGNLY 
LNVHSATNKS GEIRAQLKP