| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2044 |
|---|
| Symbol | |
|---|
| ID | 5053544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 2113678 |
|---|
| End bp | 2115831 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640472218 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_001156819 |
|---|
| Protein GI | 145590222 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.73931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAA AAGGAATGTG TCCCGTTGCC CACGGGGCCA ATACTGAAGC AAGCGAAACC
CCGATGGCCT GGTGGCCAAA AGCGCTTAAT CTGGACATTC TTCATCAGCA AGATACAAAG
ACAAACCCAA TGGGCTCTTC TTTTAGTTAT CGAGATGAAT TAAAAAAGCT GGATGTTGGG
GCACTCAAAA AAGATATGAA AGATCTGTTG ACCAATAGTC AAGATTGGTG GCCGGCAGAC
TGGGGGCATT ATGGTGGCTT AATGATTAGG ATGGCTTGGC ATTCTGCAGG CAGCTACAGA
ATTGCAGATG GTCGTGGCGG AGCGGGTACA GGCAATCAAC GGTTTGCTCC AATCAATTCT
TGGCCAGATA ATGCCAACCT AGATAAAGCA CGTCGCCTGT TGTGGCCTAT CAAAAAGAAA
TACGGTAACA AAATTAGCTG GGCTGACCTC ATGATCTTAG CGGGCACTAT CGCTTATGAA
TCTATGGGCC TAAAAACATT CGGCTTCTCA TTCGGCCGCG AAGACATCTG GCATCCAGAA
AAAGACATTT ACTGGGGCTC TGAAAAAGAA TGGCTTCAAA AAAGTGGTGG TAAAGGCTCT
CGCTATTCGG GTGAGCGCGA GTTAAGCAAT CCATTGGCGG CAGTCATGAT GGGCTTAATT
TATGTAAACC CCGAAGGCGT CGACGGCAAA CCAGACCCAT TAAAAACAGC TCAAGATATG
CGGGTGACTT TCGCTCGCAT GGCCATGAAT GATGAAGAAA CCGTTGCCCT TACTGCCGGC
GGCCATACTG TGGGCAAAGC ACATGGCAAT GGTAATGCTG CTAACTTAGG GCCAGCCCCA
GAGGCTGCCC CAATTGATGA GCAAGGTCTT GGCTGGATGA ATCATAAGAC GCGCGGCATT
GGCAGAGACG CCGTTACCAG CGGACTCGAG GGCGCCTGGA CGACACATCC AACACAGTGG
GATAACGGTT ACTTTAATTT GCTTCTTAAT TACGATTGGA AACTGACAGA GAGCCCAGCA
GGCGCGCACC AGTATGAGCC CATCAACATT AAAGAAGAAG ATAAGCCCGT TGATGTTGAA
GATGCTTCCA TCCGTTGTAT GCCGATGATG ACGGATGCAG ATATTGCCCT GAAGATGGAT
CCTGAATACC GCAAGATCTC AGAAAGATTC TCTAAGGACC AAGCGTATTT CTCAGAAACG
TTTGCTAAAG CTTGGTTCAA GCTAACCCAT CGAGATATGG GCCCCAAGGC AAGATACTTT
GGCCCAGATG TTCCAAAGGA AGAGCTGATC TGGCAAGACC CCATACCCTC TGGCCCAAAA
TCTTATGACA TTGATGCCGT TAAAGCCAAG ATCAAGGCTA GCGGACTATC AATGAGTGAT
ATGGTGACAA CGGCTTGGGA TAGCGCTCGC ACTTTCAGGG GATCAGATAA ACGCGGGGGA
GCAAATGGCG CACGCATACG TTTAGCACCA CAAAAAGATT GGATGGGCAA TGAGCCAGAA
CGATTGGCAA GAGTGCTTGC AGTCTACGAA AAAATTGGTA AAGAGTGCGG TATTAGTATT
GCCGACACCA TCATCCTTGG TGGCAATATT GGGATTGAGC AAGCCGCTAA AGCTGGTGGA
TTTGATGTGA AGGTGCCATT TACATCAGGA CGCGGTGATG CGATTCAAGC AATGACAGAT
GTAGAGTCTT TTGAAGTCCT TGAACCGCTA GCGGATGGCT TTCGCAATTG GCTAAAAGAG
AGTTATGTTG TAACGCCCGA AGAGCTGCTC TTAGACCGTA CCCAGCTGAT GGGGCTCACA
GCACAAGAGA TGACTGTTCT TATAGGCGGC ATGCGCGTAC TGGGAACAAA CTATGGCGGA
TCTAAACAAG GTGTATTCAC CGAAAAAGAG GGCGTGCTCA GCAATGATTT CTTTGTCAAT
CTAACGGATA TGAACTACCT TTGGAAGCCA ACAGGTCAAA ATAGTTATGA CATTGTTGAG
CGAAATACAG AAAAGACAAA GTGGACCGCC ACTCGAGCAG ATCTCGTATT TGGATCCAAC
TCAATTTTGC GCGCTTATGC AGAAGTTTAT GCACAAGACG ACAATAAAGA AAAGTTTGTT
AATGACTTTA TTGCTGCCTG GACTAAAGTA ATGAATGCAG ATTTATTTAA TTAA
|
|---|
| Protein sequence | MTSKGMCPVA HGANTEASET PMAWWPKALN LDILHQQDTK TNPMGSSFSY RDELKKLDVG
ALKKDMKDLL TNSQDWWPAD WGHYGGLMIR MAWHSAGSYR IADGRGGAGT GNQRFAPINS
WPDNANLDKA RRLLWPIKKK YGNKISWADL MILAGTIAYE SMGLKTFGFS FGREDIWHPE
KDIYWGSEKE WLQKSGGKGS RYSGERELSN PLAAVMMGLI YVNPEGVDGK PDPLKTAQDM
RVTFARMAMN DEETVALTAG GHTVGKAHGN GNAANLGPAP EAAPIDEQGL GWMNHKTRGI
GRDAVTSGLE GAWTTHPTQW DNGYFNLLLN YDWKLTESPA GAHQYEPINI KEEDKPVDVE
DASIRCMPMM TDADIALKMD PEYRKISERF SKDQAYFSET FAKAWFKLTH RDMGPKARYF
GPDVPKEELI WQDPIPSGPK SYDIDAVKAK IKASGLSMSD MVTTAWDSAR TFRGSDKRGG
ANGARIRLAP QKDWMGNEPE RLARVLAVYE KIGKECGISI ADTIILGGNI GIEQAAKAGG
FDVKVPFTSG RGDAIQAMTD VESFEVLEPL ADGFRNWLKE SYVVTPEELL LDRTQLMGLT
AQEMTVLIGG MRVLGTNYGG SKQGVFTEKE GVLSNDFFVN LTDMNYLWKP TGQNSYDIVE
RNTEKTKWTA TRADLVFGSN SILRAYAEVY AQDDNKEKFV NDFIAAWTKV MNADLFN
|
|---|
| |