| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2035 |
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| Symbol | |
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| ID | 5053135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2105683 |
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| End bp | 2106420 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640472209 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001156810 |
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| Protein GI | 145590213 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA AAGTACGCGT TTCCAAATTA CTATCTGAAC TGGGCCTCTG CTCACGTCGT
GAAGCTGACT CCTATATTGA GCAAGGCTTG GTCACCGTGG ACGGCGAGGT GGTGAATGAA
CTGGGCGTAC GCGCCTACCG CCATCAAAAA ATCGAATTGC AATCTGGAGC AAAGGCGCAA
CAAGCCTCAC GCATCACTGT GATCCTCAAT AAGCCCGTTG GTTATATCTC TCATTTTGAT
GATGAGCAAG AATATCAGCC GGCCGCATCA TTAATTACTC CTGATAATTA CTTTGCTAGT
CCGCTAGATA AAGGTAGAAA CCCACGCTTT AATACCAAAG GCTTGGCTCC TGCGGGGCGC
TTAGACATCG ACTCAACAGG CTTGCTGGTA TTAACTCAAG ATGGGCGCAT TGCTAAATTA
CTCATTGGCG AAAACAGTCC GATTGAAAAA GAATACTTAG TGCGCGTGGA AGGCAAGCTT
TCGTTTGAGG ATCTAGATAA ATTAAGACAT GGCCTCACAC TTGACGACGT TGTTCTGAAG
CCTGCACAAG TGAGCTGGCA AAATGAAGAT CAGTTGCGCT TTGTTTTGCG AGAGGGTCGT
AAGCGTCAAA TTCGTCGCAT GTGCGAAATG GTTGGCCTTA AGGTCATAGG ATTAAAACGG
GTGAGGATAG GTCGGATCTC TTTAGGCCCC CTTCCCCCAG GACAATGGCG TTTTGTAAGG
CCTGAAGAGC AATTCTAA
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| Protein sequence | MEEKVRVSKL LSELGLCSRR EADSYIEQGL VTVDGEVVNE LGVRAYRHQK IELQSGAKAQ
QASRITVILN KPVGYISHFD DEQEYQPAAS LITPDNYFAS PLDKGRNPRF NTKGLAPAGR
LDIDSTGLLV LTQDGRIAKL LIGENSPIEK EYLVRVEGKL SFEDLDKLRH GLTLDDVVLK
PAQVSWQNED QLRFVLREGR KRQIRRMCEM VGLKVIGLKR VRIGRISLGP LPPGQWRFVR
PEEQF
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