| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2034 |
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| Symbol | |
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| ID | 5052807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2104253 |
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| End bp | 2105581 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640472208 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_001156809 |
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| Protein GI | 145590212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.636554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCA CCTTGAAGAA GCCCCCAATT TATAAAGTCC TTTATTTTCA AGTACTTACG
GCTGTTGTAA TTGGGGTTTT GTTAGGCCAT TTTTACCCTT CCTTGGGCGT AGATATGAAG
CCTTTCGGGG ATGCCTTTAT TAAGGGCATC AAGATGTTAA TTGCCCCGAT CATTTTTTGT
ACGGTTGTTC TTGGCATTGC CGGCATGGAA GACATGAAAA AGGTTGGAAA AACAGGCGGC
CTTGCGCTTT TGTACTTTGA GATTGTCAGC ACAATTGCAT TAATGGTCGG ATTGGTTGTT
GTGAATGTGT TGCAGCCTGG TGCGGGAATG AATATTGATC CAGCAAGCTT AGATACCAAA
GGTATTGCCG CTTACACTGG CCCAGGAAAA ATGGGGACTA CCACTGAGTT CCTACTCAAC
ATTATTCCAA GCAGTGCAGT CGATGCATTT GCTAAAGGTG AAATCTTACA AGTTCTCTTC
ATTGCAATAT TGTTCGGTTT CGCATTACAT AAGTTCGGTG GTCGCGGAAC AATGGTGTTT
GATTTAATTG AAAAAACATC CCATGTTCTT TTTGACATGA TTGCCATCAT CATGAAATTT
GCGCCAATCG GCGCTTTTGG TGCAATGGCA TTTACGATTG GAAAATATGG CATAGGCTCA
TTATTCTCAT TGGGTAAATT AATGGGCTCG TTTTATTTAA CTTGCTTGCT CTTCGTATTT
ATTGTTCTTG GGATCATCGC GCGACTCAAT GGGTTTAATA TTTTTAAATT CGTGCGCTAC
ATTAAGGAAG AGCTTTTAAT TGTGCTGGGC ACCTCTTCTT CCGAGTCAGT TTTGCCACGC
ATGATGGAAA AGATGGAGCT TTTAGGTGCT AAGAAAGCCT GCGTTGGCTT GGTGATTCCA
ACTGGCTATT CATTTAATCT GGACGGCACT TCGATTTATT TAACAATGGC TGCAGTATTT
ATTGCGCAAG CTACAAATAC GCCGATGACC CTCCTACAAG AAGTTACTCT CTTGGCAGTG
TTATTGCTTA CCTCTAAGGG AGCCGCCGGT GTAACTGGTA GTGGATTTAT TGTGTTGGCA
GCCACTCTTT CAGCGGTAGG AGACGTGCCA GTAGCAGGCT TGGCAATCAT CTTAGGCATT
GATCGCTTTA TGTCAGAGGC GCGTGCATTG ACTAACTTGG TCGGTAACGG AGTAGCTACT
ATTGTGGTTG CTAAGTGGAC AGGTGAATTA GACCAAAAGC AATTAACTCG CGCATTAAAT
CGGGATGACT GGATTGAGGC TCAAGAGCCA GAAATGATCT TGGATCATCA ACAAGACAAA
ATGCGCTGA
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| Protein sequence | MTATLKKPPI YKVLYFQVLT AVVIGVLLGH FYPSLGVDMK PFGDAFIKGI KMLIAPIIFC
TVVLGIAGME DMKKVGKTGG LALLYFEIVS TIALMVGLVV VNVLQPGAGM NIDPASLDTK
GIAAYTGPGK MGTTTEFLLN IIPSSAVDAF AKGEILQVLF IAILFGFALH KFGGRGTMVF
DLIEKTSHVL FDMIAIIMKF APIGAFGAMA FTIGKYGIGS LFSLGKLMGS FYLTCLLFVF
IVLGIIARLN GFNIFKFVRY IKEELLIVLG TSSSESVLPR MMEKMELLGA KKACVGLVIP
TGYSFNLDGT SIYLTMAAVF IAQATNTPMT LLQEVTLLAV LLLTSKGAAG VTGSGFIVLA
ATLSAVGDVP VAGLAIILGI DRFMSEARAL TNLVGNGVAT IVVAKWTGEL DQKQLTRALN
RDDWIEAQEP EMILDHQQDK MR
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