Gene Pnuc_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2026 
Symbol 
ID5051894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2098320 
End bp2098640 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content43% 
IMG OID640472200 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001156801 
Protein GI145590204 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000760647 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGCCG ACATCAATAT TTATAAGGAG CTTCACTTGA ACAAAGCCGA ACTAATCGCA 
GCGATTGCTG ACGACGCGGA GATCTCAAAA GCCAAAGCAG AATTTGCATT GAATTCAGCT
ATCGACACAA TCATCAAAGC TGTTACTAAG GGTGACTCAG TACAACTGAT CGGCTTTGGT
ACTTTTGCAT CTGGTAAGCG TGCTGCACGT ATGGGTCGTA ACCCAAAAAC TGGCGAGCCA
CTCAAAATTG CTGCTGCAAA AACTGTTAAG TTTTCTGCTG GTAAAGCATT TAAAGATTCA
GTTAACAAGC GTAAGAAGTA A
 
Protein sequence
MCADINIYKE LHLNKAELIA AIADDAEISK AKAEFALNSA IDTIIKAVTK GDSVQLIGFG 
TFASGKRAAR MGRNPKTGEP LKIAAAKTVK FSAGKAFKDS VNKRKK