| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2022 |
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| Symbol | |
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| ID | 5053623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2093739 |
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| End bp | 2094674 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640472196 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_001156797 |
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| Protein GI | 145590200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.102546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAACATA GCGCTCCACC ACTTTTCAGA CAGGGCATAC CAGCCTTACT TAAACTGATT
GTCTGTCTGT CGATCAGCAT CGCTCTGATG CTGATCGATT TTCGTTTCAA AGCACTCGAT
CCTATCCGCA ACAATGTGAA TTGGATTTTG CGTCCACTTG AATATGTCAT GATGGCGCCG
CGCAATGCAT TTGAAGCAAG CTCAGACTAT TTCACCACGC GCTCAACTCT TGATCAAGAA
AACCAAGTGA TGAAGGCTCG TCAAGCAGAG CTTTCTTTGC TGGCAAATCA ATCTGAATTT
CTTATGGTGG AAAACCAAAA TCTGCGCGAG CTTATGGCGC TTCAAAAACA GGTTCCTTTT
AAAACTTTGC CAGTAGAAAT TCTATTTAAT CCACCCAATC CAATTTCACA ACGCATTGTG
ATAAACCGCG GTAGCAATGA TGGCCTTAAG CTAGGCAACC CTATTGCCAA CGATTCAGGC
ATTTTGGGTC AAGTGGTACG CCTATACGAG CGCTCTGCCG AGGTTTCTTT GCTGGAAGAT
CGGGATTTTG CGGTTCCAGT GCAAGTGGCT CGCAATGGTT TGCGTGCTGC CGTGTTTGGC
GCAGGACGCG GCAACCCTCT GGAACTTCGT TATCTACCAG TTGCGAGCGA TCTGGAAGTG
GGCGACATCC TGCTAACCTC TGGAATTGAT GGAGTTTATC CCCCTGGTTT CGCGGTGGCC
GTGATTAGCA AAATCGAGCG TAACGCCGAC AAAAATTCTT CCAATGTTTT TTGTGTTCCT
GTAGCGGCAG TCAATCGCTA CCGCCAAGCC TTAGCTCTTT TATATGACCC GCAATTTGAT
GCAAAGGCAG CAAGCAATAA TACTAAGTCT GCCACTGGCG CACCTTTAAC AAACAATCCT
GGCCGACGCC AAACGCGAGC GCGAGGAATG CAATGA
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| Protein sequence | MQHSAPPLFR QGIPALLKLI VCLSISIALM LIDFRFKALD PIRNNVNWIL RPLEYVMMAP
RNAFEASSDY FTTRSTLDQE NQVMKARQAE LSLLANQSEF LMVENQNLRE LMALQKQVPF
KTLPVEILFN PPNPISQRIV INRGSNDGLK LGNPIANDSG ILGQVVRLYE RSAEVSLLED
RDFAVPVQVA RNGLRAAVFG AGRGNPLELR YLPVASDLEV GDILLTSGID GVYPPGFAVA
VISKIERNAD KNSSNVFCVP VAAVNRYRQA LALLYDPQFD AKAASNNTKS ATGAPLTNNP
GRRQTRARGM Q
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