Gene Pnuc_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2021 
Symbol 
ID5053354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp2092671 
End bp2093714 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content48% 
IMG OID640472195 
Productrod shape-determining protein MreB 
Protein accessionYP_001156796 
Protein GI145590199 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0698648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTT TTTTCCGCAG CTACTTTTCC AATGACCTAG CCATCGACCT AGGAACCGCC 
AACACCTTAA TTTATATGCG TGAGCGGGGT ATTGTGCTCG ACGAACCTTC CGTGGTGGCA 
ATTCGCCAAG AAGGTGGTCC AAACGGCAAA AAGACTATTT TGGCCGTCGG CAAAGAGGCA 
AAAGCCATGT TGGGGCGCGT TCCAGGGAAT ATTGAGGCGA TTCGCCCTAT GAAAGACGGC 
GTTATTGCCG ATTTCACTAT TACCGAACAA ATGCTCAAGC AATTTATCAA GCTTGTGCAT 
GAAAGCAAAT TATTAAAGCC AAGTCCACGC ATCATTATTT GCGTTCCTTG CGGCTCCACT 
CAAGTTGAAC GTCGTGCGAT TCGCGAATCT GCATTAGGTG CTGGTGCATC ACAAGTATTT 
TTGATTGAAG AGCCGATGGC TGCGGCAATT GGTTCTGGCT TGCCGGTTTC TGAAGCAGCT 
GGTTCGATGG TTGTCGATAT CGGCGGCGGT ACAACTGAAG TTGGTGTGAT GTCCTTAGGT 
GGCATGGTTT ACAAAGGCTC AGTACGCGTT GGTGGTGACA AGTTTGACGA AGCAATCACT 
AATTACATTC GTCGTAACTA CGGCATGTTG ATTGGTGAAC AAACTGCTGA GTTGATTAAG 
AAAACAATTG GCTCTGCATT TCCAGGCGCA GAAGTGCGCG AGATGGAAGT TAAAGGCCGC 
AATCTTTCTG AAGGTATTCC ACGTAGCTTC ACTGTAACTA GCAATGAAGT TTTGGAAGCA 
TTGACAGATC CACTGAATCA AATCGTGACT GCTGTAAAAG CTGCTCTCGA GCAAATCCCA 
CCAGAGCTAG CATCCGATAT CGCCGAGCGC GGCATGATGC TTACTGGTGG CGGAGCCTTA 
TTGCGCGACC TAGACCGCCT CTTGCTTGAA GAAACTGGCT TGCCAATTCA TGTAGCAGAA 
GATCCGTTGA CTTGCGTTGC CCGCGGTTGC GGTATCGCTC TTGAGCGTAT GGATAAGTTA 
GGCGGAGTGT TCTCGCACGA GTAA
 
Protein sequence
MFGFFRSYFS NDLAIDLGTA NTLIYMRERG IVLDEPSVVA IRQEGGPNGK KTILAVGKEA 
KAMLGRVPGN IEAIRPMKDG VIADFTITEQ MLKQFIKLVH ESKLLKPSPR IIICVPCGST 
QVERRAIRES ALGAGASQVF LIEEPMAAAI GSGLPVSEAA GSMVVDIGGG TTEVGVMSLG 
GMVYKGSVRV GGDKFDEAIT NYIRRNYGML IGEQTAELIK KTIGSAFPGA EVREMEVKGR 
NLSEGIPRSF TVTSNEVLEA LTDPLNQIVT AVKAALEQIP PELASDIAER GMMLTGGGAL 
LRDLDRLLLE ETGLPIHVAE DPLTCVARGC GIALERMDKL GGVFSHE