| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2019 |
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| Symbol | gatA |
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| ID | 5052043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2090802 |
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| End bp | 2092319 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640472193 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001156794 |
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| Protein GI | 145590197 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.86082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTGGC ACAACACCCC TATCGCCTTA ATGGCAAAAG CACTTGCTGC AAAAGAGGTC
TCTAGCACTG AGTTAACCCA GCACTTCTTG GGCCGCATTG AGGCCGGAAA GCGGTGGAAT
GCTTATCTTG ATGTGAATGC TCACTTAAGC TTAGAACAAG CATCTAAAGC AGATCAGCTA
ATTTATTCCG GTAACGCCGG CAAGTTAACT GGCATTCCAG TGGCCCACAA AGATGTCTTT
GTAACCCGTG GCTGGAAGTC AACGGCAGCA TCCAAAATCT TGGTTGGATA TCAGAGCCCT
TTTGATGCCA CCGTAGTTGC CAATCTGGGA ATTCCAGATG AAAACAATCC CCATGGCGCT
GGCATGGTTT GCTTGGGTAA AACCAATATG GACGAGTTTG CAATGGGCTC CTCCAATGAA
AACTCTGCCT TTGGCCCAGT CTTAAACCCT TGGAATGCTG CTCACGTAGC AGGCGGCTCC
TCGGGTGGCT CAGCCGCCGC TGTAGCGGCA GGATTGGCCC CAATTGCTAC TGGTACTGAT
ACCGGTGGCT CGATTCGCCA GCCAGCCGCA TTTTGTGGTC TGACCGGAAT TAAGCCTAGT
TATGGGCGCG TGTCGCGCTA CGGCATGATT GCCTATGCCT CTTCGCTCGA TCAAGCGGGC
CCTATGGGCA AGACTGCAGA AGATTGCGCC CTGCTGCTAT CAGCGATGTC TTCGCATGAT
CCACGTGACT CCACTTCTTT GGCTGATTCT GGGGAGGACT ACGGTCGTTA CCTCAATCAA
TATTGGCAAG AGGGAAGTGC AAACCCTGCA AAACCATTAG AAGGTTTGCG CGTTGGCTTA
CCAAAAGAAT TTTTTGCTGA AGGCTTAGCA AGTGATGTGG CCAAATCAGT GAATGAAGCA
GCCAAACTTT TAGAAAATTT AGGTGCCACA TTAGTTGAGG TGAGCTTGCC TAAAACCAAG
TTATCAATTC CTGTGTATTA CGTTTTAGCA CCCGCAGAAG CATCTAGTAA TTTGAGTCGT
TTCGATGGTG TGCGTTATGG ATATCGCGCC AAAGAATATC GTGATCTTGG CGACATGTAT
TCCAAGTCAC GTACTGAGGG TTTTGGTGCA GAGGTAAAAC GCCGCATCAT GATTGGAACT
TACGTTCTTT GTCATGGTTA CTACGATGCG TACTATCTTC AAGCACAAAA AATCCGTCGC
ATTATTGCGG CAGATTTCCA GGCCGCATTT AATCAATGTG ACGTCATCCT GGGGCCTGTA
GCCCCTGATG TGGCCTGGCG TTTGGGTGAA AAATCAAAAG ACCCAGTACA AATGTATTTA
GAGGATATTT ACACGCTTTC AACAAACTTA GCAGGCTTGC CAGCGATGAG CGTTCCCTGT
GGGTTTAATG CAAACAACTT ACCAATTGGC ATGCAATTAA TCGGCAACTA TTTTTCCGAA
GCGCGCCTAT TACAGGTTGC CCATCAATAT CAGCAAGCCA GCGATTGGCA TTTGCGTTCA
GCAAGTGAGG TGGCATGA
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| Protein sequence | MSWHNTPIAL MAKALAAKEV SSTELTQHFL GRIEAGKRWN AYLDVNAHLS LEQASKADQL
IYSGNAGKLT GIPVAHKDVF VTRGWKSTAA SKILVGYQSP FDATVVANLG IPDENNPHGA
GMVCLGKTNM DEFAMGSSNE NSAFGPVLNP WNAAHVAGGS SGGSAAAVAA GLAPIATGTD
TGGSIRQPAA FCGLTGIKPS YGRVSRYGMI AYASSLDQAG PMGKTAEDCA LLLSAMSSHD
PRDSTSLADS GEDYGRYLNQ YWQEGSANPA KPLEGLRVGL PKEFFAEGLA SDVAKSVNEA
AKLLENLGAT LVEVSLPKTK LSIPVYYVLA PAEASSNLSR FDGVRYGYRA KEYRDLGDMY
SKSRTEGFGA EVKRRIMIGT YVLCHGYYDA YYLQAQKIRR IIAADFQAAF NQCDVILGPV
APDVAWRLGE KSKDPVQMYL EDIYTLSTNL AGLPAMSVPC GFNANNLPIG MQLIGNYFSE
ARLLQVAHQY QQASDWHLRS ASEVA
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