| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2018 |
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| Symbol | gatB |
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| ID | 5052889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2089333 |
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| End bp | 2090802 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640472192 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001156793 |
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| Protein GI | 145590196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.705494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATGGG AAGTTGTTAT TGGTCTAGAG ACCCACGCAC AGTTACAGAC ACAATCTAAG
ATTTTTAGTG GTGCGAGTAC ACGCTTTGGT GCCGAGCCAA ATACTCAAGC ATGCGCAGTT
GATTTGGCGC TGCCTGGTGT ACTGCCAGTC CTCAATCGTG AGGCTGTTGA GCATGCCATT
CGTTTTGGTT TAGCAGTGAA TGCAAAAATT TCGCCAGCGA GTATTTTTGC TCGCAAGAAT
TATTTCTATC CCGACTTACC TAAGGGTTAT CAGATTAGTC AGATGGAAAT CCCAGTAGTC
GTTGGTGGCC ATGTGGAAAT TCTGGTTGGT GATGAAGTAA AAGTAGTCGA GCTGACTCGC
GCCCATATGG AAGAGGATGC AGGTAAATCG GTCCATGAAG AGGACTTTAC TGGCCCTTAT
GGTGAACCCT CTAGCGGTAT TGATTTAAAT CGCGCAGGAA CACCTCTATT AGAGATCGTG
ACTGAGCCGG TAATGCGCAG CGCTGCCGAG GCGGTTGCCT ATGCCAAGGC CCTGCATGGC
TTGGTTGTGT GGCTAGGGGT ATGTGACGGC AATATGCAAG AAGGCTCTTT CCGCTGCGAT
GCTAACGTTT CGGTGCGCCC AAAAGGTCAG GTTGAGTTTG GTACCCGTTG TGAAATCAAG
AATTTGAATT CCTTCCGCTT TTTGGAAGAG GCCATTCAGT ATGAGGTACG TCGTCAAATC
GAATTGATTG AGGATGGTGG AACCGTTGTT CAAGAGACGC GTCTGTATGA TCCCGATCGC
GGGGAAACGC GCAGCATGCG CAGTAAAGAA GACGCCAATG ACTATCGCTA CTTCCCTGAC
CCAGATTTAT TGCCAGTAGT GATTGATGAT GCTTGGATTG AAGATGTGCG TAGCAAGATG
CCCGCACTAC CTGCGCAATT GCGTGAACAG TGGCAAAGCG AATTTGGCTT AAGCGCATAC
GATGCGCAAT TGCTGACTCA AGACCGCGAT ACCGCAAAAG TATTTGAAGA GTTATTAGCA
ATCGTAGGCA AACCCTTGGC AAAAGCGGCC GCTAATTTAA TTACTGGTGA ATTCGCTTCT
TCTTTAAATC GTGCTGGCAT TGCTGCAGCA AATGCACCAT TAAAAGCGGA GCATTTAGCG
TCGCTTTTGA CTCGTGTAGC AGATGGCACT ATCTCCCATA AGATTGCCAA AGACATCTTT
GCCATTCTGT GGGAAGAGGC TATTGCAGGC AAGGCTATTA GTACAGTTGA TCAAGTGATT
GAAGCTAAAG GCTTAAAGCA AATTAGCGAT AGTGGCGCCA TCGAGGCCAT CATTGATCAA
GTATTGGCGG TTAATCAGAA GTCAGTTGAA GAATTCCGCT CTGGTAAAGA GAAGGCCTTT
AATGCGCTCG TAGGCCAGAT CATGAAGGCT TCTCAAGGCA AGGCAAATCC CGGTCAAGTA
AATGAACTGT TGCGTAAAAA GCTCGGTTAA
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| Protein sequence | MQWEVVIGLE THAQLQTQSK IFSGASTRFG AEPNTQACAV DLALPGVLPV LNREAVEHAI
RFGLAVNAKI SPASIFARKN YFYPDLPKGY QISQMEIPVV VGGHVEILVG DEVKVVELTR
AHMEEDAGKS VHEEDFTGPY GEPSSGIDLN RAGTPLLEIV TEPVMRSAAE AVAYAKALHG
LVVWLGVCDG NMQEGSFRCD ANVSVRPKGQ VEFGTRCEIK NLNSFRFLEE AIQYEVRRQI
ELIEDGGTVV QETRLYDPDR GETRSMRSKE DANDYRYFPD PDLLPVVIDD AWIEDVRSKM
PALPAQLREQ WQSEFGLSAY DAQLLTQDRD TAKVFEELLA IVGKPLAKAA ANLITGEFAS
SLNRAGIAAA NAPLKAEHLA SLLTRVADGT ISHKIAKDIF AILWEEAIAG KAISTVDQVI
EAKGLKQISD SGAIEAIIDQ VLAVNQKSVE EFRSGKEKAF NALVGQIMKA SQGKANPGQV
NELLRKKLG
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