| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2016 |
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| Symbol | |
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| ID | 5053345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2087649 |
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| End bp | 2088650 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640472190 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001156791 |
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| Protein GI | 145590194 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AGGCAACTGA TCTTCATCCA CTCATGCAGG AGTATTTGCA TGAGTTGCAT
GTGTTGCGTC AACTTTCGCC GCATACGCTT AAAGCGTATG GGATGGATCT AAGTGATCTA
CAAAATTTCG CCCTTGAAGA TTCCGTTGAA TTATTAAAGG TCAGCAATGG GCATGTGCGC
CGATGGGCTG GCCGTTTGCA TTCCAAAGGT AAATCCTCTA GAAGTATTGC AAGAGCGCTT
TCTGCATGGC GCGGTTGGTA TGACTGGCTT ACTGAGAAAG ATGCGAGACG TGATGCGCGT
GCAGGCAAAG TAACCAATAA CTTGATTGCT AATCCGGTTG ATGACGTCAA GGCTCCAAAG
CGTTTGAAGT CTTTGCCTAA AGCCTTATCG GTTGAGCAGG CGCTTGCCTT GGTAAACCAG
GCGGTAAAAG AGGCTGAAGA AAAAAAGGAT TTGGAATCGA TTCGTGATGC CGCGATTATT
GATTTGCTCT ATTCGTCGGG CTTGCGTCTT TCAGAGTTAT TGGGAATAGA TGTGATGCAA
AGCAAAGATC GCCAACATGA ATCAGCTGGC TGGTTAGATT GGGATGCTGC AGAGGTCACC
GTTTTGGGTA AGGGCGGCAA ACGACGCTCT GTTCCTGTTG GTGTTCCTGC CATGAAATCT
CTGGCAGTAT GGCGTGAGCT ACGAGATGCC GGCAGCTACT CTGAAGAGTC GATTGCTCTC
TTTTTATCTG CTACGGGTAA GCGTCTATCG CCACGAACCG TGCAGGCTAG ATTACGCACC
CTGGCTATGC GAGCAGGCCT TCCTACCCAT GTGCACCCTC ATATGATGCG CCACAGCTTT
GCGAGCCATG TCTTGCAATC CTCGCAAGAT TTGCGCGCTG TTCAGGAGAT GTTGGGGCAC
GCTAGTATCG CTAGTACCCA GATTTATACC TCCCTGGATT TTCAGCACCT TGCTCAGGCA
TACGATAAAG CGCATCCGCG TGCAAAGGCT GGTAAAGGCT GA
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| Protein sequence | MKLKATDLHP LMQEYLHELH VLRQLSPHTL KAYGMDLSDL QNFALEDSVE LLKVSNGHVR
RWAGRLHSKG KSSRSIARAL SAWRGWYDWL TEKDARRDAR AGKVTNNLIA NPVDDVKAPK
RLKSLPKALS VEQALALVNQ AVKEAEEKKD LESIRDAAII DLLYSSGLRL SELLGIDVMQ
SKDRQHESAG WLDWDAAEVT VLGKGGKRRS VPVGVPAMKS LAVWRELRDA GSYSEESIAL
FLSATGKRLS PRTVQARLRT LAMRAGLPTH VHPHMMRHSF ASHVLQSSQD LRAVQEMLGH
ASIASTQIYT SLDFQHLAQA YDKAHPRAKA GKG
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