Gene Pnuc_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2003 
Symbol 
ID5052258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2075751 
End bp2076917 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content46% 
IMG OID640472177 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_001156778 
Protein GI145590181 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACG ATTACTTCTT CACCTCAGAA TCCGTTTCTG AAGGTCACCC CGATAAAGTA 
GCAGACCAAA TTTCTGATGC AATCTTGGAC GCCATCTTGG CCCAAGATCC TACTGCACGT
GTTGCAGCAG AAACTTTATG TAATACCGGT TTAGTGGTTC TTGCTGGTGA AATTACTACC
CACGCTAACG TTGATTACAT TCAGGTAGCA CGCAATACAT TGCGTGAAAT TGGTTACGAC
AATACAGATT ACGGTATCGA TTACAAAGGT TGCGCAGTGT TAGTTGCTTA TGACAAGCAA
AGCCCCGATA TCGCACAAGG TGTTGATAAG GCTCATGATG ATGGTCTTGA CCAAGGCGCT
GGCGACCAAG GCTTAATGTT TGGCTATGCA TGCGACGAGA CTTCTGAGCT CATGCCTATG
CCAATTCATT TGTCACATCG CTTAGTAGAG CGTCAATCAC AATTGCGCCG CGACGGCCGT
TTGAACTGGT TGCGTCCTGA TGCAAAGTCA CAAGTGACAT TGCGTTATGT GGATGGTAAG
CCTGACTCAA TCGATACAGT TGTTTTGTCA ACTCAACACG ATGAAGAGAT TTCTCTCGAG
AAATTGCGCG AAGCGGTTAT TGAAGAAATC ATCAAACCAG TATTGCCTAA GCATTTAATC
AAAGGTGCGA TCAATTTCTT GGTTAACCCA ACGGGTCGTT TTGTTATCGG CGGCCCACAG
GGTGATTGCG GTTTAACTGG CCGTAAGATT ATTGTGGATA CTTACGGCGG TGCAGCCCCT
CACGGCGGCG GCGCTTTCTC TGGTAAAGAT CCATCTAAGG TTGACCGTTC TGCTGCATAC
GCTGGACGTT ATGTTGCAAA GAACGTAGTG GCTGCAGGTC TAGCAAGCAA GTGCTTGATT
CAGATCTCTT ACGCTATTGG TGTTGCTAAG CCAACTTCAG TGATGGTGAG TACATTCGGT
ACAGGCAAGA TTTCGGATGA AAAGATTGCT CAATTGGTTT CAGAGAATTT TGACTTGCGT
CCAAAAGGTA TCGTGAAGAT GCTGAACCTC TTGCGCCCTA TCTATCGTAA GACTGCTGCT
TATGGCCACT TTGGTCGTGA AGAGCCAGAA TTTACTTGGG AGCAAACAGA TAAAGCAGCT
GCATTACGTG CGGCAGCAGG CCTGTAA
 
Protein sequence
MANDYFFTSE SVSEGHPDKV ADQISDAILD AILAQDPTAR VAAETLCNTG LVVLAGEITT 
HANVDYIQVA RNTLREIGYD NTDYGIDYKG CAVLVAYDKQ SPDIAQGVDK AHDDGLDQGA
GDQGLMFGYA CDETSELMPM PIHLSHRLVE RQSQLRRDGR LNWLRPDAKS QVTLRYVDGK
PDSIDTVVLS TQHDEEISLE KLREAVIEEI IKPVLPKHLI KGAINFLVNP TGRFVIGGPQ
GDCGLTGRKI IVDTYGGAAP HGGGAFSGKD PSKVDRSAAY AGRYVAKNVV AAGLASKCLI
QISYAIGVAK PTSVMVSTFG TGKISDEKIA QLVSENFDLR PKGIVKMLNL LRPIYRKTAA
YGHFGREEPE FTWEQTDKAA ALRAAAGL